CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g043090m.g
(
Citrus sinensis
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
orange1.1g043090m.g
T181640_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g043090m
FAR1
1
70
VSNTWYRKSREKYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMETKRWRIIEVELEHNHLLSP
Links
Other
FAR1
family TFs
Other
Citrus sinensis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10025157m.g
Citrus clementina
Ciclev10025157m.g
N
0.829
cassava10866.m1
Manihot esculenta
cassava10866.m1
N
0.786
TCM_027270
Theobroma cacao
TCM_027270
N
0.771
Cucsa.096040
Cucumis sativus
Cucsa.096040
N
0.771
Eucgr.J03076
Eucalyptus grandis
Eucgr.J03076
N
0.771
POPTR_0001s20880
Populus trichocarpa
POPTR_0001s20880
N
0.757
Solyc06g068200.1
Solanum lycopersicum
Solyc06g068200.1
N
0.757
29841.m002892
Ricinus communis
29841.m002892
N
0.757
Eucgr.J03074
Eucalyptus grandis
Eucgr.J03074
N
0.743
GLYMA15G00440
Glycine max
GLYMA15G00440
N
0.729