Pm003854 (Prunus mume)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Pm003854 T180980_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm003854 FAR1 63 157

Links

Other FAR1 family TFs
Other Prunus mume TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N 0.944
29889.m003255 Ricinus communis 29889.m003255 N 0.722
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.911
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N 0.700
FRS11 Arabidopsis thaliana AT1G10240 N 0.878
BGIOSGA012540 Oryza indica BGIOSGA012540 N 0.744
Bo5g010680 Brassica oleracea Bo5g010680 N 0.844
Bostr.13671s0465 Boechera stricta Bostr.13671s0465 N 0.856
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.833
Cagra.4395s0212 Capsella grandiflora Cagra.4395s0212 N 0.856
Carubv10012599m.g Capsella rubella Carubv10012599m.g N 0.856
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.911
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.733
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.944
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.722
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.900
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.922
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.711
evm.TU.supercontig_113.2 Carica papaya evm.TU.supercontig_113.2 N 0.911
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.722
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.722
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.922
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.744
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.933
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.733
Gorai.006G118900 Gossypium raimondii Gorai.006G118900 N 0.867
Gorai.011G195800 Gossypium raimondii Gorai.011G195800 N 0.700
MDP0000233216 Malus domestica MDP0000233216 N 0.733
MDP0000234814 Malus domestica MDP0000234814 N 0.910
MDP0000786741 Malus domestica MDP0000786741 N 0.733
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.811
OB04G20960 Oryza brachyantha OB04G20960 N 0.789
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.722
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.933
ORGLA04G0107700 Oryza glaberrima ORGLA04G0107700 N 0.744
OS04G0443000 Oryza sativa OS04G0443000 N 0.744
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.733
PDK_20s1722071g001 Phoenix dactylifera PDK_20s1722071g001 N 0.700
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.856
PK06148.1 Cannabis sativa PK06148.1 N 0.911
PK12746.1 Cannabis sativa PK12746.1 N 0.733
Pm008290 Prunus mume Pm008290 N 0.733
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.733
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.922
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.733
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 1.000
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.733
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.922
Sb06g017580 Sorghum bicolor Sb06g017580 N 0.744
Si012297m.g Setaria italica Si012297m.g N 0.722
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.878
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N 0.700
TCM_021310 Theobroma cacao TCM_021310 N 0.711
TCM_041141 Theobroma cacao TCM_041141 N 0.889
Thhalv10006984m.g Eutrema salsugineum Thhalv10006984m.g N 0.844
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.800
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.811
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.800
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.733
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.722
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.944