orange1.1g004420m.g (Citrus sinensis)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 orange1.1g004420m.g T181615_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g004420m FAR1 56 150
orange1.1g004429m FAR1 56 150
orange1.1g004769m FAR1 56 150

Links

Other FAR1 family TFs
Other Citrus sinensis TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 1.000
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.944
Pm008290 Prunus mume Pm008290 N 0.944
29889.m003255 Ricinus communis 29889.m003255 N 0.944
MDP0000233216 Malus domestica MDP0000233216 N 0.944
MDP0000786741 Malus domestica MDP0000786741 N 0.944
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.933
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.922
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.922
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.911
TCM_021310 Theobroma cacao TCM_021310 N 0.911
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.911
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.911
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.911
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N 0.900
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.900
Gorai.011G195800 Gossypium raimondii Gorai.011G195800 N 0.900
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.900
PK12746.1 Cannabis sativa PK12746.1 N 0.900
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.889
POPTR_0008s10810 Populus trichocarpa POPTR_0008s10810 N 0.889
PDK_20s1722071g001 Phoenix dactylifera PDK_20s1722071g001 N 0.889
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N 0.878
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.878
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.722
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.722
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.722
Pm003854 Prunus mume Pm003854 N 0.722
29685.m000503 Ricinus communis 29685.m000503 N 0.722
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.722
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.722
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.711
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.711
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.711
TCM_041141 Theobroma cacao TCM_041141 N 0.711
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.711
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.711
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.711
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.711
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.711
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.711
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.711
PK06148.1 Cannabis sativa PK06148.1 N 0.711
OB04G20960 Oryza brachyantha OB04G20960 N 0.700
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.700
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.700
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.700
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.700