cassava28226.m1 (Manihot esculenta)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 cassava28226.m1 T181043_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava28226.m1 FAR1 53 147

Links

Other FAR1 family TFs
Other Manihot esculenta TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N 0.722
29889.m003255 Ricinus communis 29889.m003255 N 0.911
Aquca_008_00101 Aquilegia coerulea Aquca_008_00101 N 0.722
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N 0.933
FRS11 Arabidopsis thaliana AT1G10240 N 0.700
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.733
cassava25471.m1 Manihot esculenta cassava25471.m1 N 0.700
Ciclev10000456m.g Citrus clementina Ciclev10000456m.g N 0.722
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.900
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.711
Eucgr.G00085 Eucalyptus grandis Eucgr.G00085 N 0.711
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.933
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.956
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.878
gene29088-v1.0-hybrid Fragaria vesca gene29088-v1.0-hybrid N 0.700
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.922
GLYMA10G00380 Glycine max GLYMA10G00380 N 0.711
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.911
Gorai.011G195800 Gossypium raimondii Gorai.011G195800 N 0.900
MDP0000233216 Malus domestica MDP0000233216 N 0.933
MDP0000234814 Malus domestica MDP0000234814 N 0.708
MDP0000786741 Malus domestica MDP0000786741 N 0.933
MLOC_15705 Hordeum vulgare MLOC_15705 N 0.711
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.900
orange1.1g047253m.g Citrus sinensis orange1.1g047253m.g N 0.733
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.911
PDK_20s1722071g001 Phoenix dactylifera PDK_20s1722071g001 N 0.878
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.711
PK06148.1 Cannabis sativa PK06148.1 N 0.733
PK12746.1 Cannabis sativa PK12746.1 N 0.900
Pm003854 Prunus mume Pm003854 N 0.733
Pm008290 Prunus mume Pm008290 N 0.933
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.967
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.722
POPTR_0008s10810 Populus trichocarpa POPTR_0008s10810 N 0.889
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.933
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.733
SapurV1A.0060s0220 Salix purpurea SapurV1A.0060s0220 N 0.816
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.978
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.722
Solyc01g103180.2 Solanum lycopersicum Solyc01g103180.2 N 0.722
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N 0.922
TCM_021310 Theobroma cacao TCM_021310 N 0.889
TCM_041141 Theobroma cacao TCM_041141 N 0.711
Traes_2AL_9A4A7514E Triticum aestivum Traes_2AL_9A4A7514E N 0.711
Traes_2BL_C1DE13045 Triticum aestivum Traes_2BL_C1DE13045 N 0.711
TRIUR3_11057 Triticum urartu TRIUR3_11057 N 0.711
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.944
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.956
VIT_12s0035g01360 Vitis vinifera VIT_12s0035g01360 N 0.722