Cagra.2420s0008 (Capsella grandiflora)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Cagra.2420s0008 T181254_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FHY3
M08114_2.00 		Arabidopsis thaliana
NHCACGCGCTNN
NNAGCGCGTGDN		 ChIP-seq
Mathelier et al.(2014)
MA0557.1 		0.989 0.989
FHY3
M09540_2.00 		Arabidopsis thaliana
NHSACGCGCBNN
NNVGCGCGTSDN		 Misc
Heinz et al.(2010)
Arabidopsis-FHY3_GSE30711 		0.989 0.989
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2420s0008.1.p FAR1 92 194

Links

Other FAR1 family TFs
Other Capsella grandiflora TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PMAA_087990 Talaromyces marneffei PMAA_087990 N
TSTA_123340 Talaromyces stipitatus TSTA_123340 N