CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene19997-v1.0-hybrid
(
Fragaria vesca
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
gene19997-v1.0-hybrid
T181435_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna19997.1-v1.0-hybrid
FAR1
96
204
SFYKEYAKSMGFAAVIKASRRSRASGKFIDAKFACSRYGTKPETSQPETAEPVSHSRESSICLKRKRGGRASQSLEKTDCKACMHVKRRQDGRWTVCTLIKEHNHDIFP
Links
Other
FAR1
family TFs
Other
Fragaria vesca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.D00033
Eucalyptus grandis
Eucgr.D00033
N
0.711
Gorai.002G163900
Gossypium raimondii
Gorai.002G163900
N
0.722
MDP0000236134
Malus domestica
MDP0000236134
N
0.719
FRS1
Populus trichocarpa
POPTR_0003s10970
N
0.744
PRUPE_ppa001166mg
Prunus persica
PRUPE_ppa001166mg
N
0.775
SapurV1A.0325s0180
Salix purpurea
SapurV1A.0325s0180
N
0.722
Solyc02g068550.1
Solanum lycopersicum
Solyc02g068550.1
N
0.700
TCM_006022
Theobroma cacao
TCM_006022
N
0.700
FRS1
Vitis vinifera
VIT_01s0011g01470
N
0.733