Gorai.011G195800 (Gossypium raimondii)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Gorai.011G195800 T181515_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G195800.1 FAR1 59 153
Gorai.011G195800.2 FAR1 59 153
Gorai.011G195800.3 FAR1 59 153
Gorai.011G195800.4 FAR1 46 130
Gorai.011G195800.5 FAR1 59 153
Gorai.011G195800.6 FAR1 59 153

Links

Other FAR1 family TFs
Other Gossypium raimondii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29685.m000503 Ricinus communis 29685.m000503 N 0.700
29889.m003255 Ricinus communis 29889.m003255 N 0.956
Aquca_025_00175 Aquilegia coerulea Aquca_025_00175 N 0.900
BRADI5G11330 Brachypodium distachyon BRADI5G11330 N 0.700
cassava28226.m1 Manihot esculenta cassava28226.m1 N 0.900
Ciclev10004395m.g Citrus clementina Ciclev10004395m.g N 0.900
Cucsa.019230 Cucumis sativus Cucsa.019230 N 0.700
Eucgr.K03522 Eucalyptus grandis Eucgr.K03522 N 0.867
evm.TU.supercontig_151.57 Carica papaya evm.TU.supercontig_151.57 N 0.878
gene05172-v1.0-hybrid Fragaria vesca gene05172-v1.0-hybrid N 0.900
GLYMA09G04394 Glycine max GLYMA09G04394 N 0.900
GLYMA15G15450 Glycine max GLYMA15G15450 N 0.889
MDP0000233216 Malus domestica MDP0000233216 N 0.956
MDP0000786741 Malus domestica MDP0000786741 N 0.956
orange1.1g004420m.g Citrus sinensis orange1.1g004420m.g N 0.900
PDK_20s1635961g004 Phoenix dactylifera PDK_20s1635961g004 N 0.878
PDK_20s1722071g001 Phoenix dactylifera PDK_20s1722071g001 N 0.844
PDK_20s1756181g001 Phoenix dactylifera PDK_20s1756181g001 N 0.700
PK12746.1 Cannabis sativa PK12746.1 N 0.900
Pm003854 Prunus mume Pm003854 N 0.700
Pm008290 Prunus mume Pm008290 N 0.956
POPTR_0002s20030 Populus trichocarpa POPTR_0002s20030 N 0.889
POPTR_0004s23620 Populus trichocarpa POPTR_0004s23620 N 0.700
POPTR_0008s10810 Populus trichocarpa POPTR_0008s10810 N 0.922
PRUPE_ppa002003mg Prunus persica PRUPE_ppa002003mg N 0.956
PRUPE_ppa002379mg Prunus persica PRUPE_ppa002379mg N 0.700
SapurV1A.0060s0220 Salix purpurea SapurV1A.0060s0220 N 0.796
SapurV1A.0158s0480 Salix purpurea SapurV1A.0158s0480 N 0.900
SapurV1A.0225s0240 Salix purpurea SapurV1A.0225s0240 N 0.700
Solyc09g075640.2 Solanum lycopersicum Solyc09g075640.2 N 0.867
TCM_021310 Theobroma cacao TCM_021310 N 0.933
VIT_05s0077g01400 Vitis vinifera VIT_05s0077g01400 N 0.922
VIT_07s0005g01120 Vitis vinifera VIT_07s0005g01120 N 0.900