CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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COCCADRAFT_25992
(
Bipolaris zeicola
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
COCCADRAFT_25992
T184891_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN
NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.694
0.523
FOXK1
M01977_2.00
Homo sapiens
NNRWMMAYAN
NTRTKKWYNN
PBM
Weirauch et al.(2014)
pTH6108
0.685
0.523
Foxk1
M00163_2.00
Mus musculus
RWMAACAA
TTGTTKWY
PBM
Badis et al.(2009)
Foxk1_2323
0.685
0.523
FOXK1
M03025_2.00
Homo sapiens
CGGACACAAT
ATTGTGTCCG
SELEX
Jolma et al.(2013)
FOXK1_1
0.685
0.523
Foxk1
M03061_2.00
Mus musculus
CGGACACAATC
GATTGTGTCCG
SELEX
Jolma et al.(2013)
Foxk1_1
0.685
0.523
Foxk1
M03062_2.00
Mus musculus
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
Foxk1_2
0.685
0.523
FOXK1
M04825_2.00
Homo sapiens
NDNRTMAAYAN
NTRTTKAYNHN
SELEX
Yin et al.(2017)
FOXK1_eDBD_HT-SELEX
0.685
0.523
FOXK1
M08120_2.00
Homo sapiens
NNNGTAAACANVNN
NNBNTGTTTACNNN
ChIP-seq
Mathelier et al.(2014)
MA0852.2
0.685
0.523
FOXK1
M09094_2.00
Homo sapiens
VNDRDAAACA
TGTTTHYHNB
Misc
Kulakovskiy et al.(2013)
FOXK1_HUMAN.H11MO.0.A
0.685
0.523
Foxk1
M09113_2.00
Mus musculus
NNGDMAACAVV
BBTGTTKHCNN
Misc
Kulakovskiy et al.(2013)
FOXK1_MOUSE.H11MO.0.A
0.685
0.523
FOXK1
M04826_2.00
Homo sapiens
NWYRYAAWYAD
HTRWTTRYRWN
SELEX
Yin et al.(2017)
FOXK1_eDBD_Methyl-HT-SELEX
0.685
0.523
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.668
0.523
NCU00019
M01991_2.00
Neurospora crassa
NNNGTAAAYAHN
NDTRTTTACNNN
PBM
Weirauch et al.(2014)
pTH9655
0.668
0.616
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EUC33721
Forkhead
364
453
KPPHSYAQLIGQAILSSEEEMLTLANIYDYIKARYAFFRHTNSGWQNSIRHNLSLNKSFAKVARRTDEPGKGMKWKIADSEKEEFIKKQL
Links
Other
Forkhead
family TFs
Other
Bipolaris zeicola
TFs
426 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026013
Oryza indica
BGIOSGA026013
N
BRADI1G23470
Brachypodium distachyon
BRADI1G23470
N
F775_31556
Aegilops tauschii
F775_31556
N
GRMZM2G022213
Zea mays
GRMZM2G022213
N
GRMZM2G058197
Zea mays
GRMZM2G058197
N
LPERR07G17330
Leersia perrieri
LPERR07G17330
N
OBART07G20020
Oryza barthii
OBART07G20020
N
OGLUM07G19790
Oryza glumaepatula
OGLUM07G19790
N
OMERI07G16710
Oryza meridionalis
OMERI07G16710
N
ONIVA07G18460
Oryza nivara
ONIVA07G18460
N
OPUNC07G18920
Oryza punctata
OPUNC07G18920
N
ORGLA07G0257500
Oryza glaberrima
ORGLA07G0257500
N
ORUFI07G20830
Oryza rufipogon
ORUFI07G20830
N
OS07G0581366
Oryza sativa
OS07G0581366
N
Pavir.Bb03216
Panicum virgatum
Pavir.Bb03216
N
Sb02g037550
Sorghum bicolor
Sb02g037550
N
Si028906m.g
Setaria italica
Si028906m.g
N