CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ORGLA07G0257500
(
Oryza glaberrima
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ORGLA07G0257500
T125108_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA07G0257500.1
C2H2 ZF
137
158
WTCQRCGKRYAVQADLKAHTKT
ORGLA07G0257500.1
C2H2 ZF
157
183
KTCGTREYRCDCGTLFTRRDSFVTHRA
Links
Other
C2H2 ZF
family TFs
Other
Oryza glaberrima
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026013
Oryza indica
BGIOSGA026013
N
0.827
OBART07G20020
Oryza barthii
OBART07G20020
N
0.827
OGLUM07G19790
Oryza glumaepatula
OGLUM07G19790
N
0.827
OMERI07G16710
Oryza meridionalis
OMERI07G16710
N
0.827
ONIVA07G18460
Oryza nivara
ONIVA07G18460
N
0.827
ORUFI07G20830
Oryza rufipogon
ORUFI07G20830
N
0.827
OS07G0581366
Oryza sativa
OS07G0581366
N
0.827
OPUNC07G18920
Oryza punctata
OPUNC07G18920
N
0.803
BRADI1G23470
Brachypodium distachyon
BRADI1G23470
N
0.798
F775_31556
Aegilops tauschii
F775_31556
N
0.798
GRMZM2G022213
Zea mays
GRMZM2G022213
N
0.798
GRMZM2G058197
Zea mays
GRMZM2G058197
N
0.798
LPERR07G17330
Leersia perrieri
LPERR07G17330
N
0.798
Sb02g037550
Sorghum bicolor
Sb02g037550
N
0.798
Si028906m.g
Setaria italica
Si028906m.g
N
0.798
Traes_2AS_9D9D66343
Triticum aestivum
Traes_2AS_9D9D66343
N
0.798
Pavir.Bb03216
Panicum virgatum
Pavir.Bb03216
N
0.798