CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000016369
(
Pelodiscus sinensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSPSIG00000016369
T186893_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXN2
M01007_2.00
Homo sapiens
NNGACGCNN
NNGCGTCNN
PBM
Nakagawa et al.(2013)
FOXN2
0.699
0.930
FOXN2
M04835_2.00
Homo sapiens
NNGCGTSNNNNNSACGCNN
NNGCGTSNNNNNSACGCNN
SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX
0.699
0.930
FOXN2
M04836_2.00
Homo sapiens
NGCATMRBNNYKATGCH
DGCATMRNNVYKATGCN
SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX
0.699
0.930
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000018429
Forkhead
112
202
KPPYSFSLLIYMAIEHSPNKSLLVKEIYSWILEHFPYFATAPTGWKNSIRHNLSLNKCFQKVERSHEKVNGKGSLWCIDPEYKPNLIQALK
ENSPSIP00000018432
Forkhead
112
188
KPPYSFSLLIYMAIEHSPNKSLLVKEIYSWILEHFPYFATAPTGWKNSIRHNLSLNKCFQKVERSHEKGEWEGSLVS
Links
Other
Forkhead
family TFs
Other
Pelodiscus sinensis
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BZIP25
Arabidopsis thaliana
AT3G54620
I
Bo3g032910
Brassica oleracea
Bo3g032910
N
Bo4g119810
Brassica oleracea
Bo4g119810
I
Bo8g084770
Brassica oleracea
Bo8g084770
I
Bra000102
Brassica rapa
Bra000102
I
Bra007083
Brassica rapa
Bra007083
I
Bra014802
Brassica rapa
Bra014802
I
Bra024310
Brassica rapa
Bra024310
I
Cagra.0562s0051
Capsella grandiflora
Cagra.0562s0051
I
Carubv10017372m.g
Capsella rubella
Carubv10017372m.g
I
Ca_03753
Cicer arietinum
Ca_03753
I
Ciclev10001051m.g
Citrus clementina
Ciclev10001051m.g
I
Cla015037
Citrullus lanatus
Cla015037
I
Cucsa.388800
Cucumis sativus
Cucsa.388800
I
evm.TU.supercontig_52.101
Carica papaya
evm.TU.supercontig_52.101
I
Gorai.004G246700
Gossypium raimondii
Gorai.004G246700
I
GSMUA_Achr7G07650_001
Musa acuminata
GSMUA_Achr7G07650_001
I
Lus10018759.g
Linum usitatissimum
Lus10018759.g
I
MDP0000176747
Malus domestica
MDP0000176747
I
PK05128.1
Cannabis sativa
PK05128.1
D
PK11472.1
Cannabis sativa
PK11472.1
I
Pm020231
Prunus mume
Pm020231
I
PRUPE_ppa005367mg
Prunus persica
PRUPE_ppa005367mg
I
ATBZIP25
Arabidopsis lyrata
scaffold_502576.1
N
Thhalv10010426m.g
Eutrema salsugineum
Thhalv10010426m.g
I