PAS_chr4_0980 (Komagataella pastoris)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 PAS_chr4_0980 T188253_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLLA0_F08206g
M01015_2.00 		Kluyveromyces lactis
NNVRYKCRNN
NNYGMRYBNN		 PBM
Nakagawa et al.(2013)
KLLA0F08206p 		0.819 0.829
AGOS_AEL327W
M01004_2.00 		Ashbya gossypii
NNVRCKCRNN
NNYGMGYBNN		 PBM
Nakagawa et al.(2013)
AEL327Wp 		0.757 0.829
FHL1
M00046_2.00 		Saccharomyces cerevisiae
NGACGCAM
KTGCGTCN		 PBM
Badis et al.(2008)
FHL1_2086 		0.687 0.780
FHL1
M01543_2.00 		Saccharomyces cerevisiae
NVDCGCRNN
NNYGCGHBN		 PBM
Zhu et al.(2009)
Fhl1 		0.687 0.780
FHL1
M07475_2.00 		Saccharomyces cerevisiae
GACGCAVN
NBTGCGTC		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0295.1 		0.687 0.780
FHL1
M08557_2.00 		Saccharomyces cerevisiae
NNNDDNGACGCAMWNNNNDN
NHNNNNWKTGCGTCNHHNNN		 Misc
DeBoer et al.(2011)
YPR104C_808 		0.687 0.780
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAY71926 Forkhead 372 459

Links

Other Forkhead family TFs
Other Komagataella pastoris TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22632_Multiple Saccharomyces mikatae 22632_Multiple I 0.687
23064_YPR104C Saccharomyces paradoxus 23064_YPR104C I 0.687
25921_YPR104C Saccharomyces bayanus 25921_YPR104C I 0.687
AACERI_AaceriAEL327W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL327W I 0.757
AGOS_AEL327W Ashbya gossypii AGOS_AEL327W D 0.757
BN7_771 Wickerhamomyces ciferrii BN7_771 I 0.803
CAGL0G01782g Candida glabrata CAGL0G01782g I 0.705
Ecym_2615 Eremothecium cymbalariae Ecym_2615 I 0.767
HPODL_04343 Ogataea parapolymorpha HPODL_04343 I 0.829
JL09_g4297 Pichia kudriavzevii JL09_g4297 I 0.797
KAFR_0D04220 Kazachstania africana KAFR_0D04220 I 0.736
KLLA0_F08206g Kluyveromyces lactis KLLA0_F08206g D 0.819
KLTH0D03036g Lachancea thermotolerans KLTH0D03036g I 0.750
KLTH0D03036g Kluyveromyces thermotolerans KLTH0D03036g I 0.750
KNAG_0A07530 Kazachstania naganishii KNAG_0A07530 I 0.715
Kpol_1018p143 Vanderwaltozyma polyspora Kpol_1018p143 I 0.708
KUCA_T00003332001 Kuraishia capsulata KUCA_T00003332001 I 0.862
Kwal_7268 Kluyveromyces waltii Kwal_7268 I 0.750
LALA0_S08e07316g Lachancea lanzarotensis LALA0_S08e07316g I 0.750
NCAS_0A11450 Naumovozyma castellii NCAS_0A11450 I 0.719
NDAI_0A04850 Naumovozyma dairenensis NDAI_0A04850 I 0.667
SAKL0B09284g Lachancea kluyveri SAKL0B09284g I 0.759
Scas_Contig705.31 Saccharomyces castellii Scas_Contig705.31 I 0.719
SKUD_169306 Saccharomyces kudriavzevii SKUD_169306 I 0.679
TBLA_0C02390 Tetrapisispora blattae TBLA_0C02390 I 0.694
TDEL_0C05550 Torulaspora delbrueckii TDEL_0C05550 I 0.671
TPHA_0M01760 Tetrapisispora phaffii TPHA_0M01760 I 0.790
XP_002494105.1 Pichia pastoris XP_002494105.1 I 0.879
FHL1 Saccharomyces cerevisiae YPR104C D 0.687
ZBAI_00452 Zygosaccharomyces bailii ZBAI_00452 I 0.676
ZBAI_05606 Zygosaccharomyces bailii ZBAI_05606 I 0.676
ZYRO0C17710g Zygosaccharomyces rouxii ZYRO0C17710g I 0.671