XP_002494105.1 (Pichia pastoris)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 XP_002494105.1 T189835_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KLLA0_F08206g
M01015_2.00 		Kluyveromyces lactis
NNVRYKCRNN
NNYGMRYBNN		 PBM
Nakagawa et al.(2013)
KLLA0F08206p 		0.819 0.829
AGOS_AEL327W
M01004_2.00 		Ashbya gossypii
NNVRCKCRNN
NNYGMGYBNN		 PBM
Nakagawa et al.(2013)
AEL327Wp 		0.757 0.829
FHL1
M00046_2.00 		Saccharomyces cerevisiae
NGACGCAM
KTGCGTCN		 PBM
Badis et al.(2008)
FHL1_2086 		0.687 0.780
FHL1
M01543_2.00 		Saccharomyces cerevisiae
NVDCGCRNN
NNYGCGHBN		 PBM
Zhu et al.(2009)
Fhl1 		0.687 0.780
FHL1
M07475_2.00 		Saccharomyces cerevisiae
GACGCAVN
NBTGCGTC		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0295.1 		0.687 0.780
FHL1
M08557_2.00 		Saccharomyces cerevisiae
NNNDDNGACGCAMWNNNNDN
NHNNNNWKTGCGTCNHHNNN		 Misc
DeBoer et al.(2011)
YPR104C_808 		0.687 0.780
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002494105.1 Forkhead 372 459

Links

Other Forkhead family TFs
Other Pichia pastoris TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
22632_Multiple Saccharomyces mikatae 22632_Multiple I 0.687
23064_YPR104C Saccharomyces paradoxus 23064_YPR104C I 0.687
25921_YPR104C Saccharomyces bayanus 25921_YPR104C I 0.687
AACERI_AaceriAEL327W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL327W I 0.757
AGOS_AEL327W Ashbya gossypii AGOS_AEL327W D 0.757
BN7_771 Wickerhamomyces ciferrii BN7_771 I 0.803
CAGL0G01782g Candida glabrata CAGL0G01782g I 0.705
Ecym_2615 Eremothecium cymbalariae Ecym_2615 I 0.767
HPODL_04343 Ogataea parapolymorpha HPODL_04343 I 0.829
JL09_g4297 Pichia kudriavzevii JL09_g4297 I 0.797
KAFR_0D04220 Kazachstania africana KAFR_0D04220 I 0.736
KLLA0_F08206g Kluyveromyces lactis KLLA0_F08206g D 0.819
KLTH0D03036g Lachancea thermotolerans KLTH0D03036g I 0.750
KLTH0D03036g Kluyveromyces thermotolerans KLTH0D03036g I 0.750
KNAG_0A07530 Kazachstania naganishii KNAG_0A07530 I 0.715
Kpol_1018p143 Vanderwaltozyma polyspora Kpol_1018p143 I 0.708
KUCA_T00003332001 Kuraishia capsulata KUCA_T00003332001 I 0.862
Kwal_7268 Kluyveromyces waltii Kwal_7268 I 0.750
LALA0_S08e07316g Lachancea lanzarotensis LALA0_S08e07316g I 0.750
NCAS_0A11450 Naumovozyma castellii NCAS_0A11450 I 0.719
NDAI_0A04850 Naumovozyma dairenensis NDAI_0A04850 I 0.667
PAS_chr4_0980 Komagataella pastoris PAS_chr4_0980 I 0.879
SAKL0B09284g Lachancea kluyveri SAKL0B09284g I 0.759
Scas_Contig705.31 Saccharomyces castellii Scas_Contig705.31 I 0.719
SKUD_169306 Saccharomyces kudriavzevii SKUD_169306 I 0.679
TBLA_0C02390 Tetrapisispora blattae TBLA_0C02390 I 0.694
TDEL_0C05550 Torulaspora delbrueckii TDEL_0C05550 I 0.671
TPHA_0M01760 Tetrapisispora phaffii TPHA_0M01760 I 0.790
FHL1 Saccharomyces cerevisiae YPR104C D 0.687
ZBAI_00452 Zygosaccharomyces bailii ZBAI_00452 I 0.676
ZBAI_05606 Zygosaccharomyces bailii ZBAI_05606 I 0.676
ZYRO0C17710g Zygosaccharomyces rouxii ZYRO0C17710g I 0.671