CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CERSUDRAFT_117427
(
Ceriporiopsis subvermispora
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CERSUDRAFT_117427
T192208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.856
0.889
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD33898
GATA
446
481
CHSCNIRETPEWRRGPDGARTLCNACGLHYAKLMRK
Links
Other
GATA
family TFs
Other
Ceriporiopsis subvermispora
TFs
203 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_pg.C_20214
Mucor circinelloides
estExt_fgeneshMC_pg.C_20214
N
0.000
fgeneshMC_pg.6_#_614
Mucor circinelloides
fgeneshMC_pg.6_#_614
N
0.000
fgeneshPB_pg.26__26
Phycomyces blakesleeanus
fgeneshPB_pg.26__26
N
0.000
K437DRAFT_230013
Tilletiaria anomala
K437DRAFT_230013
N
0.000
MVLG_06281
Microbotryum violaceum
MVLG_06281
N
0.000
PFL1_04904
Pseudozyma flocculosa
PFL1_04904
N
0.000
PGTG_21257
Puccinia graminis
PGTG_21257
N
0.000
PHSY_004928
Pseudozyma hubeiensis
PHSY_004928
N
0.000
PNEG_00916
Pneumocystis murina
PNEG_00916
N
0.000
PredSwiss_ASS2010_870.2
Pneumocystis carinii
PredSwiss_ASS2010_870.2
N
0.000
PredSwiss_CON3140.2
Pneumocystis carinii
PredSwiss_CON3140.2
N
0.000
PSEUBRA_SCAF1g00537
Pseudozyma brasiliensis
PSEUBRA_SCAF1g00537
N
0.000
sr12243
Sporisorium reilianum
sr12243
N
0.000
UHOR_01423
Ustilago hordei
UHOR_01423
N
0.000