CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF1g00537
(
Pseudozyma brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PSEUBRA_SCAF1g00537
T127192_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST10113
C2H2 ZF
404
429
YTCKVPGCGKCFKRSEHLKRHVRSIH
EST10113
C2H2 ZF
435
459
YLCPYPACNKRFSRHDNLNQHARVH
Links
Other
C2H2 ZF
family TFs
Other
Pseudozyma brasiliensis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PHSY_004928
Pseudozyma hubeiensis
PHSY_004928
N
0.821
sr12243
Sporisorium reilianum
sr12243
N
0.821
UHOR_01423
Ustilago hordei
UHOR_01423
N
0.821
UM00946
Ustilago maydis
UM00946
N
0.821
K437DRAFT_230013
Tilletiaria anomala
K437DRAFT_230013
N
0.797
PFL1_04904
Pseudozyma flocculosa
PFL1_04904
N
0.792
PGTG_21257
Puccinia graminis
PGTG_21257
N
0.774
MVLG_06281
Microbotryum violaceum
MVLG_06281
N
0.762
fgeneshPB_pg.26__26
Phycomyces blakesleeanus
fgeneshPB_pg.26__26
N
0.758
PNEG_00916
Pneumocystis murina
PNEG_00916
N
0.757
PredSwiss_ASS2010_870.2
Pneumocystis carinii
PredSwiss_ASS2010_870.2
N
0.757
PredSwiss_CON3140.2
Pneumocystis carinii
PredSwiss_CON3140.2
N
0.757