CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLRG_05626
(
Colletotrichum graminicola
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
GLRG_05626
T193450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wc-1
M01236_2.00
Neurospora crassa
MCGATCGM
KCGATCGK
PBM
Lambert et al.(2019)
pTH9706
0.865
0.944
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFQ30482
GATA
909
944
CANCHTRNTPEWRRGPSGQRDLCNSCGLRWAKQVGR
Links
Other
GATA
family TFs
Other
Colletotrichum graminicola
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
27914.m000423
Ricinus communis
27914.m000423
N
0.000
AT3G59470
Arabidopsis thaliana
AT3G59470
N
0.000
Bo6g076470
Brassica oleracea
Bo6g076470
N
0.000
Bo8g093280
Brassica oleracea
Bo8g093280
N
0.000
Bostr.20903s0171
Boechera stricta
Bostr.20903s0171
N
0.000
Bra003377
Brassica rapa
Bra003377
N
0.000
Cagra.5954s0021
Capsella grandiflora
Cagra.5954s0021
N
0.000
Carubv10017836m.g
Capsella rubella
Carubv10017836m.g
N
0.000
cassava30288.valid.m1
Manihot esculenta
cassava30288.valid.m1
N
0.000
cassava38728.m1
Manihot esculenta
cassava38728.m1
N
0.000
Ca_02686
Cicer arietinum
Ca_02686
N
0.000
Ciclev10021841m.g
Citrus clementina
Ciclev10021841m.g
N
0.000
Cla010925
Citrullus lanatus
Cla010925
N
0.000
Cucsa.094440
Cucumis sativus
Cucsa.094440
N
0.000
evm.TU.supercontig_195.42
Carica papaya
evm.TU.supercontig_195.42
N
0.000
gene21527-v1.0-hybrid
Fragaria vesca
gene21527-v1.0-hybrid
N
0.000
gene21669-v1.0-hybrid
Fragaria vesca
gene21669-v1.0-hybrid
N
0.000
GLYMA11G13610
Glycine max
GLYMA11G13610
N
0.000
GLYMA12G05600
Glycine max
GLYMA12G05600
N
0.000
GLYMA15G03440
Glycine max
GLYMA15G03440
N
0.000
Gorai.005G016700
Gossypium raimondii
Gorai.005G016700
N
0.000
Gorai.005G126700
Gossypium raimondii
Gorai.005G126700
N
0.000
MDP0000618200
Malus domestica
MDP0000618200
N
0.000
mgf020729m
Mimulus guttatus
mgf020729m
N
0.000
MTR_2g098920
Medicago truncatula
MTR_2g098920
N
0.000
MTR_4g067290
Medicago truncatula
MTR_4g067290
N
0.000
orange1.1g025532m.g
Citrus sinensis
orange1.1g025532m.g
N
0.000
PGSC0003DMG402027016
Solanum tuberosum
PGSC0003DMG402027016
N
0.000
PK13380.1
Cannabis sativa
PK13380.1
N
0.000
Pm003725
Prunus mume
Pm003725
N
0.000
POPTR_0007s01870
Populus trichocarpa
POPTR_0007s01870
N
0.000
POPTR_0017s05780
Populus trichocarpa
POPTR_0017s05780
N
0.000
PRUPE_ppa008878mg
Prunus persica
PRUPE_ppa008878mg
N
0.000
PRUPE_ppa011567mg
Prunus persica
PRUPE_ppa011567mg
N
0.000
SapurV1A.0834s0190
Salix purpurea
SapurV1A.0834s0190
N
0.000
SapurV1A.1078s0040
Salix purpurea
SapurV1A.1078s0040
N
0.000
SapurV1A.4098s0020
Salix purpurea
SapurV1A.4098s0020
N
0.000
scaffold_503155.1
Arabidopsis lyrata
scaffold_503155.1
N
0.000
TCM_020020
Theobroma cacao
TCM_020020
N
0.000
Thhalv10006173m.g
Eutrema salsugineum
Thhalv10006173m.g
N
0.000