POPTR_0017s05780 (Populus trichocarpa)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03101 (FAR1) IPR004330 POPTR_0017s05780 T180111_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s05780.1 FAR1 97 185

Links

Other FAR1 family TFs
Other Populus trichocarpa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0007s01870 Populus trichocarpa POPTR_0007s01870 N 0.966
SapurV1A.4098s0020 Salix purpurea SapurV1A.4098s0020 N 0.955
TCM_020020 Theobroma cacao TCM_020020 N 0.933
PRUPE_ppa011567mg Prunus persica PRUPE_ppa011567mg N 0.933
cassava30288.valid.m1 Manihot esculenta cassava30288.valid.m1 N 0.933
Gorai.005G126700 Gossypium raimondii Gorai.005G126700 N 0.933
VIT_05s0102g00690 Vitis vinifera VIT_05s0102g00690 N 0.933
27914.m000423 Ricinus communis 27914.m000423 N 0.933
MDP0000618200 Malus domestica MDP0000618200 N 0.921
evm.TU.supercontig_195.42 Carica papaya evm.TU.supercontig_195.42 N 0.921
SapurV1A.0834s0190 Salix purpurea SapurV1A.0834s0190 N 0.921
SapurV1A.1078s0040 Salix purpurea SapurV1A.1078s0040 N 0.921
PGSC0003DMG402027016 Solanum tuberosum PGSC0003DMG402027016 N 0.921
PK13380.1 Cannabis sativa PK13380.1 N 0.921
Ciclev10021841m.g Citrus clementina Ciclev10021841m.g N 0.910
gene21669-v1.0-hybrid Fragaria vesca gene21669-v1.0-hybrid N 0.910
orange1.1g025532m.g Citrus sinensis orange1.1g025532m.g N 0.910
cassava38728.m1 Manihot esculenta cassava38728.m1 N 0.910
Gorai.005G016700 Gossypium raimondii Gorai.005G016700 N 0.910
mgf020729m Mimulus guttatus mgf020729m N 0.910
Cucsa.094440 Cucumis sativus Cucsa.094440 N 0.899
Cla010925 Citrullus lanatus Cla010925 N 0.899
Solyc06g073200.2 Solanum lycopersicum Solyc06g073200.2 N 0.894
MTR_2g098920 Medicago truncatula MTR_2g098920 N 0.888
Ca_02686 Cicer arietinum Ca_02686 N 0.888
GLYMA15G03440 Glycine max GLYMA15G03440 N 0.865
GLYMA11G13610 Glycine max GLYMA11G13610 N 0.865
GLYMA12G05600 Glycine max GLYMA12G05600 N 0.854
MTR_4g067290 Medicago truncatula MTR_4g067290 N 0.831
MDP0000348552 Malus domestica MDP0000348552 N 0.818
Bo6g076470 Brassica oleracea Bo6g076470 N 0.787
Bra003377 Brassica rapa Bra003377 N 0.787
AT3G59470 Arabidopsis thaliana AT3G59470 N 0.775
Thhalv10006173m.g Eutrema salsugineum Thhalv10006173m.g N 0.775
scaffold_503155.1 Arabidopsis lyrata scaffold_503155.1 N 0.775
Carubv10017836m.g Capsella rubella Carubv10017836m.g N 0.775
Cagra.5954s0021 Capsella grandiflora Cagra.5954s0021 N 0.775
Bostr.20903s0171 Boechera stricta Bostr.20903s0171 N 0.775
Bo8g093280 Brassica oleracea Bo8g093280 N 0.764
PRUPE_ppa008878mg Prunus persica PRUPE_ppa008878mg N 0.700
Pm003725 Prunus mume Pm003725 N 0.700