OGLUM05G27770 (Oryza glumaepatula)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OGLUM05G27770 T194396_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA19
M06893_2.00 		Arabidopsis thaliana
BNGATCBGATY
RATCVGATCNV		 Dap-seq
OMalley et al.(2016)
GATA19_col_a 		0.813 0.933
GATA19
M06894_2.00 		Arabidopsis thaliana
HNGATCBGATY
RATCVGATCND		 Dap-seq
OMalley et al.(2016)
GATA19_colamp_a 		0.813 0.933
GATA20
M06884_2.00 		Arabidopsis thaliana
GATCBGAT
ATCVGATC		 Dap-seq
OMalley et al.(2016)
GATA20_col_a 		0.802 0.900
GATA20
M06885_2.00 		Arabidopsis thaliana
HNGATCNGATBND
HNVATCNGATCND		 Dap-seq
OMalley et al.(2016)
GATA20_colamp_a 		0.802 0.900
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM05G27770.1 GATA 1 30

Links

Other GATA family TFs
Other Oryza glumaepatula TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015364 Calypte anna Aan_R015364 I
Afo_R001760 Aptenodytes forsteri Afo_R001760 I
Alligator_sinensis_CCG020380.1 Alligator sinensis Alligator_sinensis_CCG020380.1 I
Brh_R011720 Buceros rhinoceros Brh_R011720 I
Cmyd_10010636 Chelonia mydas Cmyd_10010636 I
ENSACAG00000001604 Anolis carolinensis ENSACAG00000001604 I
ENSAMEG00000019874 Ailuropoda melanoleuca ENSAMEG00000019874 I
ENSAPLG00000001852 Anas platyrhynchos ENSAPLG00000001852 I
MSGN1 Bos taurus ENSBTAG00000039113 I
MSGN1 Canis familiaris ENSCAFG00000003750 I
MSGN1 Callithrix jacchus ENSCJAG00000032633 I
MSGN1 Cavia porcellus ENSCPOG00000003061 I
ENSCSAG00000000377 Chlorocebus sabaeus ENSCSAG00000000377 I
MSGN1 Dasypus novemcinctus ENSDNOG00000013441 I
Msgn1 Dipodomys ordii ENSDORG00000003509 I
MSGN1 Equus caballus ENSECAG00000002724 I
MSGN1 Erinaceus europaeus ENSEEUG00000015222 I
ENSFALG00000001820 Ficedula albicollis ENSFALG00000001820 I
MSGN1 Felis catus ENSFCAG00000013583 I
MSGN1 Homo sapiens ENSG00000151379 D
MSGN1 Gallus gallus ENSGALG00000016469 I
MSGN1 Gorilla gorilla ENSGGOG00000012168 I
MSGN1 Loxodonta africana ENSLAFG00000015319 I
ENSLOCG00000017878 Lepisosteus oculatus ENSLOCG00000017878 I
ENSMEUG00000006206 Macropus eugenii ENSMEUG00000006206 I
MSGN1 Meleagris gallopavo ENSMGAG00000016374 I
ENSMICG00000010842 Microcebus murinus ENSMICG00000010842 I
MSGN1 Myotis lucifugus ENSMLUG00000007599 I
MSGN1 Macaca mulatta ENSMMUG00000008141 I
MSGN1 Monodelphis domestica ENSMODG00000004056 I
ENSMPUG00000019484 Mustela putorius furo ENSMPUG00000019484 I
Msgn1 Mus musculus ENSMUSG00000047002 D
ENSNLEG00000018810 Nomascus leucogenys ENSNLEG00000018810 I
MSGN1 Ornithorhynchus anatinus ENSOANG00000002188 I
ENSOARG00000016765 Ovis aries ENSOARG00000016765 I
MSGN1 Oryctolagus cuniculus ENSOCUG00000000309 I
MSGN1 Otolemur garnettii ENSOGAG00000012569 I
ENSP00000281047 Macaca fascicularis ENSP00000281047 I
ENSP00000281047-D1 Bos grunniens ENSP00000281047-D1 I
ENSPANG00000004064 Papio anubis ENSPANG00000004064 I
MSGN1 Procavia capensis ENSPCAG00000015116 I
ENSPPYG00000012628 Pongo abelii ENSPPYG00000012628 I
ENSPSIG00000001846 Pelodiscus sinensis ENSPSIG00000001846 I
MSGN1 Pan troglodytes ENSPTRG00000011679 I
MSGN1 Pteropus vampyrus ENSPVAG00000015666 I
Msgn1 Rattus norvegicus ENSRNOG00000028518 I
MSGN1 Sorex araneus ENSSARG00000007866 I
MSGN1 Sus scrofa ENSSSCG00000026538 I
ENSSTOG00000013981 Ictidomys tridecemlineatus ENSSTOG00000013981 I
MSGN1 Tupaia belangeri ENSTBEG00000001387 I
MSGN1 Taeniopygia guttata ENSTGUG00000013122 I
ENSTSYG00000003733 Tarsius syrichta ENSTSYG00000003733 I
MSGN1 Tursiops truncatus ENSTTRG00000015917 I
Gfo_R015241 Geospiza fortis Gfo_R015241 I
Myotis_brandtii_MSGN1_10020188 Myotis brandtii Myotis_brandtii_MSGN1_10020188 I
Ogr03919 Ophisaurus gracilis Ogr03919 I
Pvit_07087 Pogona vitticeps Pvit_07087 I