CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PAAG_05818
(
Paracoccidioides sp lutzii
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PAAG_05818
T194594_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.861
0.917
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEH34771
GATA
435
470
CHSCNRAETPEWRRGPDGARTLCNACGLHYAKLTRK
Links
Other
GATA
family TFs
Other
Paracoccidioides sp lutzii
TFs
204 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ALNC14_059010
Albugo laibachii
ALNC14_059010
N
estExt_fgenesh1_pg.C_80097
Phytophthora capsici
estExt_fgenesh1_pg.C_80097
N
F443_18208
Phytophthora parasitica
F443_18208
N
fgenesh_scip_prom.28083.8498
Phytophthora lateralis
fgenesh_scip_prom.28083.8498
N
HpaG808188
Hyaloperonospora arabidopsidis
HpaG808188
N
maker-pir_contig_380-snap-gene-0.13
Pythium irregulare
maker-pir_contig_380-snap-gene-0.13
N
maker-piw_contig_292-fgenesh-gene-0.2
Pythium iwayamai
maker-piw_contig_292-fgenesh-gene-0.2
N
maker-pve_contig_274-fgenesh-gene-0.2
Pythium vexans
maker-pve_contig_274-fgenesh-gene-0.2
N
Physo140584
Phytophthora sojae
Physo140584
N
PITG_13032
Phytophthora infestans
PITG_13032
N
PYU1_G000358
Pythium ultimum
PYU1_G000358
N
snap_masked-par_contig_136-abinit-gene-0.22
Pythium arrhenomanes
snap_masked-par_contig_136-abinit-gene-0.22
N
SPRG_02234
Saprolegnia parasitica
SPRG_02234
N