snap_masked-par_contig_136-abinit-gene-0.22 (Pythium arrhenomanes)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 snap_masked-par_contig_136-abinit-gene-0.22 T279990_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
This gene encodes an integral membrane protein that transports the neurotransmitter serotonin from synaptic spaces into presynaptic neurons. The encoded protein terminates the action of serotonin and recycles it in a sodium-dependent manner. This protein is a target of psychomotor stimulants, such as amphetamines and cocaine, and is a member of the sodium:neurotransmitter symporter family. A repeat length polymorphism in the promoter of this gene has been shown to affect the rate of serotonin uptake. There have been conflicting results in the literature about the possible effect, if any, that this polymorphism may play in behavior and depression. [provided by RefSeq, May 2019]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EPrPR00000014763 Myb 119 163

Links

Other Myb/SANT family TFs
Other Pythium arrhenomanes TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
maker-pir_contig_380-snap-gene-0.13 Pythium irregulare maker-pir_contig_380-snap-gene-0.13 N 0.870
maker-piw_contig_292-fgenesh-gene-0.2 Pythium iwayamai maker-piw_contig_292-fgenesh-gene-0.2 N 0.870
PYU1_G000358 Pythium ultimum PYU1_G000358 N 0.863
ALNC14_059010 Albugo laibachii ALNC14_059010 N 0.851
SPRG_02234 Saprolegnia parasitica SPRG_02234 N 0.819
maker-pve_contig_274-fgenesh-gene-0.2 Pythium vexans maker-pve_contig_274-fgenesh-gene-0.2 N 0.790
F443_18208 Phytophthora parasitica F443_18208 N 0.788
fgenesh_scip_prom.28083.8498 Phytophthora lateralis fgenesh_scip_prom.28083.8498 N 0.788
Physo140584 Phytophthora sojae Physo140584 N 0.788
Phyra76681 Phytophthora ramorum Phyra76681 N 0.788
estExt_fgenesh1_pg.C_80097 Phytophthora capsici estExt_fgenesh1_pg.C_80097 N 0.788
PITG_13032 Phytophthora infestans PITG_13032 N 0.699
gw1.2.1819.1 Fragilariopsis cylindrus gw1.2.1819.1 I 0.696