CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PHACADRAFT_208823
(
Phanerochaete carnosa
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
PHACADRAFT_208823
T194747_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKM55306
GATA
361
395
CMTCGRTDSPEWRKGPQGPKTLCNACGLRWAKSVR
Links
Other
GATA
family TFs
Other
Phanerochaete carnosa
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0008_2302
Arabidopsis lyrata
Al_scaffold_0008_2302
I
TRFL5
Arabidopsis thaliana
AT1G15720
D
AT5G58340
Arabidopsis thaliana
AT5G58340
I
Bo5g146770
Brassica oleracea
Bo5g146770
I
Bo9g134990
Brassica oleracea
Bo9g134990
I
Bostr.7128s0187
Boechera stricta
Bostr.7128s0187
I
Bra039470
Brassica rapa
Bra039470
I
Cagra.2238s0052
Capsella grandiflora
Cagra.2238s0052
I
TRFL5
Arabidopsis lyrata
fgenesh2_kg.1__1721__AT1G15720.1
I
Thhalv10013531m.g
Eutrema salsugineum
Thhalv10013531m.g
I
Thhalv10022421m.g
Eutrema salsugineum
Thhalv10022421m.g
I