Thhalv10013531m.g (Eutrema salsugineum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Thhalv10013531m.g T290032_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRFL5
M02285_2.00 		Arabidopsis thaliana
WGCCCTAN
NTAGGGCW		 PBM
Weirauch et al.(2014)
pTH7099 		0.774 0.804
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10013531m Myb 398 447
Thhalv10013541m Myb 396 445
Thhalv10013542m Myb 396 445

Links

Other Myb/SANT family TFs
Other Eutrema salsugineum TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g134990 Brassica oleracea Bo9g134990 I 0.891
Al_scaffold_0008_2302 Arabidopsis lyrata Al_scaffold_0008_2302 I 0.873
AT5G58340 Arabidopsis thaliana AT5G58340 I 0.873
Bo5g146770 Brassica oleracea Bo5g146770 I 0.842
Bra039470 Brassica rapa Bra039470 I 0.822
Cagra.2238s0052 Capsella grandiflora Cagra.2238s0052 I 0.820
Carubv10011791m.g Capsella rubella Carubv10011791m.g I 0.820
TRFL5 Arabidopsis lyrata fgenesh2_kg.1__1721__AT1G15720.1 I 0.818
Bostr.7128s0187 Boechera stricta Bostr.7128s0187 I 0.818
TRFL5 Arabidopsis thaliana AT1G15720 D 0.774
Thhalv10022421m.g Eutrema salsugineum Thhalv10022421m.g I 0.741