CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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V565_302880
(
Rhizoctonia solani
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
V565_302880
T195631_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sub-1
M01235_2.00
Neurospora crassa
NVMGATCGRNN
NNYCGATCKBN
PBM
Lambert et al.(2019)
pTH8614
0.828
0.559
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEP45205
GATA
6
39
CHSCLLPKVAEWPHGPDGPHTLCEVCGSYYAKLV
Links
Other
GATA
family TFs
Other
Rhizoctonia solani
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M408DRAFT_175095
Serendipita vermifera
M408DRAFT_175095
N
0.000
PaG_02922
Pseudozyma aphidis
PaG_02922
I
0.000
PHSY_000207
Pseudozyma hubeiensis
PHSY_000207
I
0.000
PSEUBRA_SCAF2g02944
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02944
I
0.000
sr10662
Sporisorium reilianum
sr10662
I
0.000
UHOR_02856
Ustilago hordei
UHOR_02856
N
0.000
UM01925
Ustilago maydis
UM01925
I
0.000