CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF2g02944
(
Pseudozyma brasiliensis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PSEUBRA_SCAF2g02944
T379477_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_09159
M02581_2.00
Puccinia graminis
WTCGGRAN
NTYCCGAW
PBM
Weirauch et al.(2014)
pTH7836
0.540
0.769
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST07871
Zinc cluster
107
147
RACLHCQKAHLTCDDSRPCIRCVKKGLADSCMDGHRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Pseudozyma brasiliensis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PaG_02922
Pseudozyma aphidis
PaG_02922
I
0.667
PHSY_000207
Pseudozyma hubeiensis
PHSY_000207
I
0.667
sr10662
Sporisorium reilianum
sr10662
I
0.667
UM01925
Ustilago maydis
UM01925
I
0.667
UHOR_02856
Ustilago hordei
UHOR_02856
N
0.629
JAAARDRAFT_35522
Jaapia argillacea
JAAARDRAFT_35522
N
0.583
GLOTRDRAFT_137651
Gloeophyllum trabeum
GLOTRDRAFT_137651
N
0.580
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
0.570
AMAG_10934
Allomyces macrogynus
AMAG_10934
I
0.565
AMAG_11531
Allomyces macrogynus
AMAG_11531
I
0.565
SPPG_09179
Spizellomyces punctatus
SPPG_09179
I
0.565
CERSUDRAFT_154783
Ceriporiopsis subvermispora
CERSUDRAFT_154783
I
0.565
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
0.565
GALMADRAFT_535775
Galerina marginata
GALMADRAFT_535775
I
0.565
K443DRAFT_671242
Laccaria amethystina
K443DRAFT_671242
I
0.565
LACBIDRAFT_399488
Laccaria bicolor
LACBIDRAFT_399488
I
0.565
M413DRAFT_24478
Hebeloma cylindrosporum
M413DRAFT_24478
I
0.565
PFL1_03021
Pseudozyma flocculosa
PFL1_03021
I
0.565
PHLGIDRAFT_76307
Phlebiopsis gigantea
PHLGIDRAFT_76307
I
0.565
PIIN_00063
Piriformospora indica
PIIN_00063
N
0.565
POSPLDRAFT_113058
Postia placenta
POSPLDRAFT_113058
I
0.565
V565_004710
Rhizoctonia solani
V565_004710
I
0.565
MELLADRAFT_118331
Melampsora laricipopulina
MELLADRAFT_118331
I
0.553
HETIRDRAFT_245864
Heterobasidion irregulare
HETIRDRAFT_245864
I
0.541
gw1.3.368.1
Heterobasidion annosum
gw1.3.368.1
I
0.541
RO3G_08081
Rhizopus oryzae
RO3G_08081
I
0.540
AGABI2DRAFT_221018
Agaricus bisporus
AGABI2DRAFT_221018
I
0.540
BN946_scf184656.g9
Trametes cinnabarina
BN946_scf184656.g9
I
0.540
CC1G_03210
Coprinopsis cinerea
CC1G_03210
I
0.540
GLOINDRAFT_38994
Rhizophagus irregularis
GLOINDRAFT_38994
I
0.540
M378DRAFT_10526
Amanita muscaria
M378DRAFT_10526
I
0.540
PGTG_09159
Puccinia graminis
PGTG_09159
D
0.540
PHACADRAFT_258404
Phanerochaete carnosa
PHACADRAFT_258404
I
0.540
PILCRDRAFT_94123
Piloderma croceum
PILCRDRAFT_94123
I
0.540
PLEOSDRAFT_1083727
Pleurotus ostreatus
PLEOSDRAFT_1083727
I
0.540
PTTG_02951
Puccinia triticina
PTTG_02951
I
0.540
SCHCODRAFT_257622
Schizophyllum commune
SCHCODRAFT_257622
I
0.540
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I
0.540
estExt_fgeneshMC_kg.C_60018
Mucor circinelloides
estExt_fgeneshMC_kg.C_60018
I
0.540
fgeneshMC_pm.9_#_186
Mucor circinelloides
fgeneshMC_pm.9_#_186
I
0.540
fgeneshPB_pg.22__185
Phycomyces blakesleeanus
fgeneshPB_pg.22__185
I
0.540
fgeneshPB_pg.2__402
Phycomyces blakesleeanus
fgeneshPB_pg.2__402
I
0.540