HCOI00225500 (Haemonchus contortus)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 HCOI00225500 T197520_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG07341
M01230_2.00 		Caenorhabditis briggsae
HGATANNN
NNNTATCD		 PBM
Lambert et al.(2019)
pTH11455 		0.850 0.714
elt-3
M08128_2.00 		Caenorhabditis elegans
TGATAAVA
TBTTATCA		 ChIP-seq
Mathelier et al.(2014)
MA0542.1 		0.850 0.714
elt-3
M09557_2.00 		Caenorhabditis elegans
DDTGATAASA
TSTTATCAHH		 Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode 		0.850 0.714
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HCOI00225500.t1 GATA 188 222

Links

Other GATA family TFs
Other Haemonchus contortus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000964201 Angiostrongylus cantonensis ACAC_0000964201 I 0.819
ACOC_0000090001 Angiostrongylus costaricensis ACOC_0000090001 I 0.819
ANCCAN_11157 Ancylostoma caninum ANCCAN_11157 I 0.819
ANCDUO_15230 Ancylostoma duodenale ANCDUO_15230 I 0.819
ANCDUO_24750 Ancylostoma duodenale ANCDUO_24750 I 0.819
BXY_0111400 Bursaphelenchus xylophilus BXY_0111400 I 0.850
CBG07341 Caenorhabditis briggsae CBG07341 D 0.850
CBN16869 Caenorhabditis brenneri CBN16869 I 0.850
CJA17630 Caenorhabditis japonica CJA17630 I 0.850
CRE22330 Caenorhabditis remanei CRE22330 I 0.850
DICVIV_08599 Dictyocaulus viviparus DICVIV_08599 I 0.819
Hba_00399 Heterorhabditis bacteriophora Hba_00399 I 0.850
HCOI00096800 Haemonchus contortus HCOI00096800 I 0.819
HCOI01260600 Haemonchus contortus HCOI01260600 I 0.867
HPBE_0001898401 Heligmosomoides bakeri HPBE_0001898401 I 0.819
NBR_0002046501 Nippostrongylus brasiliensis NBR_0002046501 I 0.819
OESDEN_01952 Oesophagostomum dentatum OESDEN_01952 I 0.819
OESDEN_22429 Oesophagostomum dentatum OESDEN_22429 I 0.819
Ppa-elt-3 Pristionchus pacificus PPA00209 I 0.850
PPA05888 Pristionchus pacificus PPA05888 I 0.850
scaffold1020-EXSNAP2012.4 Pristionchus exspectatus scaffold1020-EXSNAP2012.4 I 0.850
scaffold161-EXSNAP2012.12 Pristionchus exspectatus scaffold161-EXSNAP2012.12 I 0.850
TELCIR_03216 Teladorsagia circumcincta TELCIR_03216 I 0.819
elt-3 Caenorhabditis elegans WBGene00001251 D 0.850