CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf31591-snap-gene-0.2
(
Meloidogyne floridensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
maker-nMf.1.1.scaf31591-snap-gene-0.2
T197648_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf31591-snap-gene-0.2-mRNA-1
GATA
21
58
CFTCGATKTSKWHRHSKPEQYICTACYNKQLRIHKKKN
Links
Other
GATA
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AT1G58220
Arabidopsis thaliana
AT1G58220
N
Bo1g087910
Brassica oleracea
Bo1g087910
N
Bostr.30057s0099
Boechera stricta
Bostr.30057s0099
N
Bra027882
Brassica rapa
Bra027882
N
Bra035457
Brassica rapa
Bra035457
N
Carubv10019784m.g
Capsella rubella
Carubv10019784m.g
N