CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10019784m.g
(
Capsella rubella
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Carubv10019784m.g
T286392_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10019784m
Myb
195
240
RKKWSAEEDEELIAAVKRHGEGSWALIAKEEFEGERTPSQLSQRWG
Links
Other
Myb/SANT
family TFs
Other
Capsella rubella
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.30057s0099
Boechera stricta
Bostr.30057s0099
N
0.862
AT1G58220
Arabidopsis thaliana
AT1G58220
N
0.852
Thhalv10024079m.g
Eutrema salsugineum
Thhalv10024079m.g
N
0.811
Bo1g087910
Brassica oleracea
Bo1g087910
N
0.806
Bra035457
Brassica rapa
Bra035457
N
0.806
Cagra.4247s0012
Capsella grandiflora
Cagra.4247s0012
N
0.784
Bra027882
Brassica rapa
Bra027882
N
0.729
Bo9g052030
Brassica oleracea
Bo9g052030
N
0.695