NV17454 (Nasonia vitripennis)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 NV17454 T198133_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.714 0.714
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.714 0.714
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.714 0.714
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.714 0.714
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.664 0.664
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.664 0.664
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.664 0.664
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.643 0.643
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.643 0.643
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.643 0.643
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.643 0.643
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.643 0.643
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.636 0.636
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.636 0.636
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NV17454-PA GCM 31 170

Links

Other GCM family TFs
Other Nasonia vitripennis TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB003620 Anopheles albimanus AALB003620 N 0.000
AATE015248 Anopheles atroparvus AATE015248 N 0.000
ACEP14712 Atta cephalotes ACEP14712 N 0.000
ACYPI007360 Acyrthosiphon pisum ACYPI007360 N 0.000
ACYPI061631 Acyrthosiphon pisum ACYPI061631 N 0.000
AFAF019448 Anopheles farauti AFAF019448 N 0.000
Afo_R004423 Aptenodytes forsteri Afo_R004423 N 0.000
Afo_R004424 Aptenodytes forsteri Afo_R004424 N 0.000
AMAM017394 Anopheles maculatus AMAM017394 N 0.000
AMEM018396 Anopheles merus AMEM018396 N 0.000
ANCCEY_11186 Ancylostoma ceylanicum ANCCEY_11186 N 0.000
ANCDUO_22746 Ancylostoma duodenale ANCDUO_22746 N 0.000
ASTEI04298 Anopheles stephensi ASTEI04298 N 0.000
BGIBMGA000762 Bombyx mori BGIBMGA000762 N 0.000
BGLB006195 Biomphalaria glabrata BGLB006195 N 0.000
Brh_R009090 Buceros rhinoceros Brh_R009090 N 0.000
Brh_R009091 Buceros rhinoceros Brh_R009091 N 0.000
CBG11788 Caenorhabditis briggsae CBG11788 N 0.000
CBG27683 Caenorhabditis briggsae CBG27683 N 0.000
CGI_10013606 Crassostrea gigas CGI_10013606 N 0.000
CGOC_0001416801 Cylicostephanus goldi CGOC_0001416801 N 0.000
CLEC007188 Cimex lectularius CLEC007188 N 0.000
Cmyd_10006636 Chelonia mydas Cmyd_10006636 N 0.000
Cmyd_10018206 Chelonia mydas Cmyd_10018206 N 0.000
D915_09728 Fasciola hepatica D915_09728 N 0.000
D918_02763 Trichuris suis D918_02763 N 0.000
DILT_0000246201 Diphyllobothrium latum DILT_0000246201 N 0.000
DILT_0001226501 Diphyllobothrium latum DILT_0001226501 I 0.000
ENSECAG00000023678 Equus caballus ENSECAG00000023678 I 0.000
ENSGMOG00000004079 Gadus morhua ENSGMOG00000004079 N 0.000
ENSLOCG00000004278 Lepisosteus oculatus ENSLOCG00000004278 N 0.000
F775_52178 Aegilops tauschii F775_52178 N 0.000
scro Drosophila melanogaster FBgn0028993 D 0.000
Gfo_R001742 Geospiza fortis Gfo_R001742 N 0.000
Gfo_R001743 Geospiza fortis Gfo_R001743 N 0.000
GPUH_0000280301 Gongylonema pulchrum GPUH_0000280301 N 0.000
Hba_18080 Heterorhabditis bacteriophora Hba_18080 N 0.000
HmN_000453400 Hymenolepis microstoma HmN_000453400 I 0.000
HmN_000683200 Hymenolepis microstoma HmN_000683200 N 0.000
HNAJ_0000742201 Hymenolepis nana HNAJ_0000742201 N 0.000
Hsal_00498--XP_394578.2_APIME Harpegnathos saltator Hsal_00498--XP_394578.2_APIME N 0.000
ISCW011755 Ixodes scapularis ISCW011755 N 0.000
L892_g18619 Steinernema scapterisci L892_g18619 N 0.000
MCOS_0000074401 Mesocestoides corti MCOS_0000074401 N 0.000
MhA1_Contig1149.frz3.gene7 Meloidogyne hapla MhA1_Contig1149.frz3.gene7 N 0.000
Myotis_brandtii_SLC6A7_10034750 Myotis brandtii Myotis_brandtii_SLC6A7_10034750 I 0.000
NECAME_06897 Necator americanus NECAME_06897 N 0.000
nRc.2.0.1.g41491 Romanomermis culicivorax nRc.2.0.1.g41491 N 0.000
Ogr00063 Ophisaurus gracilis Ogr00063 I 0.000
Ogr05812 Ophisaurus gracilis Ogr05812 N 0.000
Ppa-ceh-28 Pristionchus pacificus PPA19627 N 0.000
PXEA_0000454701 Protopolystoma xenopodis PXEA_0000454701 N 0.000
PXEA_0002847001 Protopolystoma xenopodis PXEA_0002847001 N 0.000
scaffold28-EXSNAP2012.55 Pristionchus exspectatus scaffold28-EXSNAP2012.55 N 0.000
SINV24463 Solenopsis invicta SINV24463 N 0.000
Sjc_0057900 Schistosoma japonicum Sjc_0057900 N 0.000
SNAPOd2T00004995001 Oikopleura dioica SNAPOd2T00004995001 N 0.000
SPER_0002786601 Spirometra erinaceieuropaei SPER_0002786601 N 0.000
SPER_0003017401 Spirometra erinaceieuropaei SPER_0003017401 N 0.000
SPU_019656 Strongylocentrotus purpuratus SPU_019656 N 0.000
SSLN_0001021301 Schistocephalus solidus SSLN_0001021301 I 0.000
Tal_R010537 Tyto alba Tal_R010537 N 0.000
nkx2-4 Xenopus tropicalis XB-GENE-487481 I 0.000
YQE_02582 Dendroctonus ponderosae YQE_02582 N 0.000