Smp_171130 (Schistosoma mansoni)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 Smp_171130 T198146_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.664 0.664
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.664 0.664
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.664 0.664
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.664 0.664
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Smp_171130.1:pep GCM 248 385

Links

Other GCM family TFs
Other Schistosoma mansoni TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
19757_YOL116W Saccharomyces mikatae 19757_YOL116W I
19874_YOL116W Saccharomyces paradoxus 19874_YOL116W I
22088_YOL116W Saccharomyces bayanus 22088_YOL116W I
CAGL0E02079g Candida glabrata CAGL0E02079g I
KAFR_0C01620 Kazachstania africana KAFR_0C01620 N
KNAG_0A01430 Kazachstania naganishii KNAG_0A01430 N
Kpol_1020p22 Vanderwaltozyma polyspora Kpol_1020p22 N
Kpol_1076p9 Vanderwaltozyma polyspora Kpol_1076p9 I
SKUD_189609 Saccharomyces kudriavzevii SKUD_189609 I
SU7_3106 Saccharomyces arboricola SU7_3106 I
TBLA_0B08540 Tetrapisispora blattae TBLA_0B08540 N
TPHA_0P01290 Tetrapisispora phaffii TPHA_0P01290 I
MSN1 Saccharomyces cerevisiae YOL116W D
ZBAI_04735 Zygosaccharomyces bailii ZBAI_04735 I
ZYRO0C02376g Zygosaccharomyces rouxii ZYRO0C02376g I