CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

D915_04811 *(Fasciola hepatica)* GCM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03615 (GCM)	IPR003902	D915_04811	T198239_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
gcm M03764_2.00	Drosophila melanogaster	HATGCGGGYVVBRCCCGCATV	BATGCGGGYVBBRCCCGCATD	SELEX Nitta et al.(2015) gcm_1	0.627	0.627
gcm M03765_2.00	Drosophila melanogaster	VATGCKGGYRCCMGCATV	BATGCKGGYRCCMGCATB	SELEX Nitta et al.(2015) gcm_2	0.627	0.627
gcm M03766_2.00	Drosophila melanogaster	YATGCGGGTACCAGCATV	BATGCTGGTACCCGCATR	SELEX Nitta et al.(2015) gcm_3	0.627	0.627
gcm M10605_2.00	Drosophila melanogaster	NDNATGCGGGYNB	VNRCCCGCATNHN	Transfac Matys et al.(2006) I$GCM_01	0.627	0.627
For this family, TFs with SR scores > 0.607* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
D915_04811	GCM	258	395	FDTFTMWPQGHCRFAYQKSASEGARRHASGWAMRNTNNHNAQILKKSCLGVLLCTAENCSLTMRPAICDKARRRQEGRPCCMPNCGGRIYNQPCRGHGGYPVTHFWREHGDTVYFQSKGTHDHRRPDLKPVRDTAARR

Links
Other GCM family TFs
Other *Fasciola hepatica* TFs