TPHA_0P01290 (Tetrapisispora phaffii)
GCR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF12550 (GCR1_C) IPR022210 TPHA_0P01290 T198656_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSN1
M00913_2.00 		Saccharomyces cerevisiae
NWWTGTCCHN
NDGGACAWWN		 PBM
Gordan et al.(2011)
Msn1 		0.709 0.709
MSN1
M08567_2.00 		Saccharomyces cerevisiae
GTCCNHAT
ATDNGGAC		 Misc
DeBoer et al.(2011)
YOL116W_1376 		0.709 0.709
MSN1
M08568_2.00 		Saccharomyces cerevisiae
HATGTCCH
DGGACATD		 Misc
DeBoer et al.(2011)
YOL116W_1378 		0.709 0.709
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCE66287 GCR1 263 341

Links

Other GCR1 family TFs
Other Tetrapisispora phaffii TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30169.m006322 Ricinus communis 30169.m006322 I
AC206901.3_FG005 Zea mays AC206901.3_FG005 I
ATMYB14 Arabidopsis lyrata Al_scaffold_0004_1573 I
AMTR_s00032p00057800 Amborella trichopoda AMTR_s00032p00057800 I
Aquca_017_00716 Aquilegia coerulea Aquca_017_00716 I
ATMYB13 Arabidopsis thaliana AT1G06180 D
MYB58 Arabidopsis thaliana AT1G16490 D
ATMYB72 Arabidopsis thaliana AT1G56160 I
ATMYB63 Arabidopsis thaliana AT1G79180 D
MYB14 Arabidopsis thaliana AT2G31180 I
MYB15 Arabidopsis thaliana AT3G23250 D
BGIOSGA006005 Oryza indica BGIOSGA006005 I
BGIOSGA014440 Oryza indica BGIOSGA014440 I
Bo1g102190 Brassica oleracea Bo1g102190 I
Bo3g025100 Brassica oleracea Bo3g025100 I
Bo3g081700 Brassica oleracea Bo3g081700 I
Bo3g185830 Brassica oleracea Bo3g185830 I
Bo4g176020 Brassica oleracea Bo4g176020 I
Bo4g176030 Brassica oleracea Bo4g176030 I
Bo5g007320 Brassica oleracea Bo5g007320 I
Bo6g077600 Brassica oleracea Bo6g077600 I
Bo6g081140 Brassica oleracea Bo6g081140 I
Bo6g122640 Brassica oleracea Bo6g122640 I
Bo7g040780 Brassica oleracea Bo7g040780 I
Bo8g105490 Brassica oleracea Bo8g105490 I
Bostr.19424s0318 Boechera stricta Bostr.19424s0318 I
Bostr.20129s0353 Boechera stricta Bostr.20129s0353 I
Bostr.24513s0107 Boechera stricta Bostr.24513s0107 I
Bostr.6758s0073 Boechera stricta Bostr.6758s0073 I
Bostr.7128s0256 Boechera stricta Bostr.7128s0256 I
Bra001907 Brassica rapa Bra001907 I
Bra003619 Brassica rapa Bra003619 I
Bra014929 Brassica rapa Bra014929 I
Bra015481 Brassica rapa Bra015481 I
Bra018267 Brassica rapa Bra018267 I
Bra023742 Brassica rapa Bra023742 I
Bra026720 Brassica rapa Bra026720 I
Bra030812 Brassica rapa Bra030812 I
Bra035097 Brassica rapa Bra035097 I
BRADI3G49180 Brachypodium distachyon BRADI3G49180 I
BRADI3G49190 Brachypodium distachyon BRADI3G49190 I
BRADI5G20130 Brachypodium distachyon BRADI5G20130 I
Cagra.0824s0021 Capsella grandiflora Cagra.0824s0021 I
Cagra.1361s0065 Capsella grandiflora Cagra.1361s0065 I
Cagra.2181s0015 Capsella grandiflora Cagra.2181s0015 I
Cagra.7286s0009 Capsella grandiflora Cagra.7286s0009 I
Carubv10011190m.g Capsella rubella Carubv10011190m.g I
Carubv10015750m.g Capsella rubella Carubv10015750m.g I
Carubv10020691m.g Capsella rubella Carubv10020691m.g I
Carubv10023905m.g Capsella rubella Carubv10023905m.g I
cassava25784.m1 Manihot esculenta cassava25784.m1 I
cassava3286.m1 Manihot esculenta cassava3286.m1 I
cassava35427.valid.m1 Manihot esculenta cassava35427.valid.m1 I
cassava37350.valid.m1 Manihot esculenta cassava37350.valid.m1 I
cassava38174.valid.m1 Manihot esculenta cassava38174.valid.m1 I
cassava47180.m1 Manihot esculenta cassava47180.m1 I
Ca_12130 Cicer arietinum Ca_12130 I
Ca_12226 Cicer arietinum Ca_12226 I
chr1.CM0295.20.nd Lotus japonicus chr1.CM0295.20.nd I
chr5.CM0071.410.nd Lotus japonicus chr5.CM0071.410.nd I
chr6.CM1613.30.nc Lotus japonicus chr6.CM1613.30.nc I
Ciclev10005102m.g Citrus clementina Ciclev10005102m.g I
Ciclev10005629m.g Citrus clementina Ciclev10005629m.g I
Ciclev10021699m.g Citrus clementina Ciclev10021699m.g I
Ciclev10022057m.g Citrus clementina Ciclev10022057m.g I
Cla006077 Citrullus lanatus Cla006077 I
Cla007705 Citrullus lanatus Cla007705 I
Cla013669 Citrullus lanatus Cla013669 I
Cla019747 Citrullus lanatus Cla019747 I
Cla021845 Citrullus lanatus Cla021845 I
Cucsa.053600 Cucumis sativus Cucsa.053600 I
Cucsa.118450 Cucumis sativus Cucsa.118450 I
Cucsa.126220 Cucumis sativus Cucsa.126220 I
Cucsa.383620 Cucumis sativus Cucsa.383620 I
Eucgr.B02144 Eucalyptus grandis Eucgr.B02144 I
Eucgr.H00158 Eucalyptus grandis Eucgr.H00158 I
Eucgr.H03057 Eucalyptus grandis Eucgr.H03057 I
Eucgr.K03262 Eucalyptus grandis Eucgr.K03262 I
evm.TU.supercontig_44.60 Carica papaya evm.TU.supercontig_44.60 I
evm.TU.supercontig_50.19 Carica papaya evm.TU.supercontig_50.19 I
F775_18231 Aegilops tauschii F775_18231 I
F775_27569 Aegilops tauschii F775_27569 I
F775_29501 Aegilops tauschii F775_29501 I
F775_30010 Aegilops tauschii F775_30010 I
F775_32664 Aegilops tauschii F775_32664 I
ATMYB58 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1001492 I
ATMYB72 Arabidopsis lyrata fgenesh2_kg.1__4638__AT1G56160.1 I
ATMYB13 Arabidopsis lyrata fgenesh2_kg.1__590__AT1G06180.1 I
ATMYB63 Arabidopsis lyrata fgenesh2_kg.2__2216__AT1G79180.1 I
MYB15 Arabidopsis lyrata fgenesh2_kg.3__2539__AT3G23250.1 I
gene08084-v1.0-hybrid Fragaria vesca gene08084-v1.0-hybrid I
gene11462-v1.0-hybrid Fragaria vesca gene11462-v1.0-hybrid I
gene29961-v1.0-hybrid Fragaria vesca gene29961-v1.0-hybrid I
GLYMA02G00820 Glycine max GLYMA02G00820 I
GLYMA03G31980 Glycine max GLYMA03G31980 I
GLYMA03G41100 Glycine max GLYMA03G41100 I
GLYMA08G17861 Glycine max GLYMA08G17861 I
GLYMA10G00930 Glycine max GLYMA10G00930 I
GLYMA10G32410 Glycine max GLYMA10G32410 I
GLYMA15G41255 Glycine max GLYMA15G41255 I
GLYMA19G34740 Glycine max GLYMA19G34740 I
GLYMA19G43740 Glycine max GLYMA19G43740 I
GLYMA20G35180 Glycine max GLYMA20G35180 I
Gorai.001G177100 Gossypium raimondii Gorai.001G177100 I
Gorai.002G106300 Gossypium raimondii Gorai.002G106300 I
Gorai.007G146200 Gossypium raimondii Gorai.007G146200 I
Gorai.011G173900 Gossypium raimondii Gorai.011G173900 I
GRMZM2G048295 Zea mays GRMZM2G048295 I
GRMZM2G095904 Zea mays GRMZM2G095904 I
GRMZM2G097636 Zea mays GRMZM2G097636 I
GRMZM2G097638 Zea mays GRMZM2G097638 I
GRMZM2G127857 Zea mays GRMZM2G127857 I
GRMZM5G833253 Zea mays GRMZM5G833253 I
GSMUA_Achr11G00410_001 Musa acuminata GSMUA_Achr11G00410_001 I
GSMUA_Achr1G09180_001 Musa acuminata GSMUA_Achr1G09180_001 I
GSMUA_Achr4G21910_001 Musa acuminata GSMUA_Achr4G21910_001 I
GSMUA_Achr4G27350_001 Musa acuminata GSMUA_Achr4G27350_001 I
GSMUA_Achr5G03920_001 Musa acuminata GSMUA_Achr5G03920_001 I
Lus10003557.g Linum usitatissimum Lus10003557.g I
Lus10022021.g Linum usitatissimum Lus10022021.g I
Lus10031758.g Linum usitatissimum Lus10031758.g I
Lus10033889.g Linum usitatissimum Lus10033889.g I
Lus10042561.g Linum usitatissimum Lus10042561.g I
MDP0000133542 Malus domestica MDP0000133542 I
MDP0000215675 Malus domestica MDP0000215675 I
MDP0000230141 Malus domestica MDP0000230141 I
MDP0000435315 Malus domestica MDP0000435315 I
MDP0000897594 Malus domestica MDP0000897594 I
MLOC_34646 Hordeum vulgare MLOC_34646 I
MLOC_43806 Hordeum vulgare MLOC_43806 I
MLOC_53640 Hordeum vulgare MLOC_53640 I
MTR_1g043050 Medicago truncatula MTR_1g043050 I
MTR_1g043080 Medicago truncatula MTR_1g043080 I
MTR_1g076150 Medicago truncatula MTR_1g076150 I
MTR_2g067420 Medicago truncatula MTR_2g067420 I
MTR_7g096930 Medicago truncatula MTR_7g096930 I
MTR_7g115650 Medicago truncatula MTR_7g115650 I
OB02G31990 Oryza brachyantha OB02G31990 I
OB04G25860 Oryza brachyantha OB04G25860 I
OB04G30570 Oryza brachyantha OB04G30570 I
OBART04G23680 Oryza barthii OBART04G23680 I
OGLUM04G23630 Oryza glumaepatula OGLUM04G23630 I
OMERI04G19570 Oryza meridionalis OMERI04G19570 I
ONIVA04G17140 Oryza nivara ONIVA04G17140 I
ONIVA04G19740 Oryza nivara ONIVA04G19740 I
OPUNC04G21230 Oryza punctata OPUNC04G21230 I
orange1.1g024484m.g Citrus sinensis orange1.1g024484m.g I
orange1.1g024492m.g Citrus sinensis orange1.1g024492m.g I
orange1.1g045411m.g Citrus sinensis orange1.1g045411m.g I
ORGLA02G0213400 Oryza glaberrima ORGLA02G0213400 I
ORGLA04G0158700 Oryza glaberrima ORGLA04G0158700 I
ORGLA04G0202400 Oryza glaberrima ORGLA04G0202400 I
ORUFI02G25970 Oryza rufipogon ORUFI02G25970 I
ORUFI04G20280 Oryza rufipogon ORUFI04G20280 I
ORUFI04G25410 Oryza rufipogon ORUFI04G25410 I
MYB30 Oryza sativa OS02G0624300 I
OS04G0594100 Oryza sativa OS04G0594100 I
Pavir.Aa01159 Panicum virgatum Pavir.Aa01159 I
Pavir.Aa01310 Panicum virgatum Pavir.Aa01310 I
Pavir.Ab02340 Panicum virgatum Pavir.Ab02340 I
Pavir.Ga00752 Panicum virgatum Pavir.Ga00752 I
Pavir.Gb00587 Panicum virgatum Pavir.Gb00587 I
Pavir.Gb00650 Panicum virgatum Pavir.Gb00650 I
Pavir.J10932 Panicum virgatum Pavir.J10932 I
PDK_20s1320951g001 Phoenix dactylifera PDK_20s1320951g001 I
PGSC0003DMG400011243 Solanum tuberosum PGSC0003DMG400011243 I
PGSC0003DMG400013405 Solanum tuberosum PGSC0003DMG400013405 I
PGSC0003DMG400016292 Solanum tuberosum PGSC0003DMG400016292 I
PGSC0003DMG400017223 Solanum tuberosum PGSC0003DMG400017223 I
PGSC0003DMG400017525 Solanum tuberosum PGSC0003DMG400017525 I
PGSC0003DMG400023405 Solanum tuberosum PGSC0003DMG400023405 I
PGSC0003DMG400038913 Solanum tuberosum PGSC0003DMG400038913 I
PK03488.1 Cannabis sativa PK03488.1 I
PK08038.1 Cannabis sativa PK08038.1 I
PK20358.1 Cannabis sativa PK20358.1 I
Pm009364 Prunus mume Pm009364 I
Pm011057 Prunus mume Pm011057 I
Pm020596 Prunus mume Pm020596 I
POPTR_0002s03960 Populus trichocarpa POPTR_0002s03960 I
POPTR_0005s09930 Populus trichocarpa POPTR_0005s09930 I
POPTR_0005s24550 Populus trichocarpa POPTR_0005s24550 I
POPTR_0007s08190 Populus trichocarpa POPTR_0007s08190 I
POPTR_0008s16660 Populus trichocarpa POPTR_0008s16660 I
POPTR_0019s03490 Populus trichocarpa POPTR_0019s03490 I
PRUPE_ppa020190mg Prunus persica PRUPE_ppa020190mg I
PRUPE_ppa021921mg Prunus persica PRUPE_ppa021921mg I
PRUPE_ppa026315mg Prunus persica PRUPE_ppa026315mg I
SapurV1A.0006s0790 Salix purpurea SapurV1A.0006s0790 I
SapurV1A.0021s0930 Salix purpurea SapurV1A.0021s0930 I
SapurV1A.0085s0540 Salix purpurea SapurV1A.0085s0540 I
SapurV1A.0233s0280 Salix purpurea SapurV1A.0233s0280 I
SapurV1A.0284s0110 Salix purpurea SapurV1A.0284s0110 I
SapurV1A.0483s0100 Salix purpurea SapurV1A.0483s0100 I
SapurV1A.1746s0010 Salix purpurea SapurV1A.1746s0010 I
Sb04g026480 Sorghum bicolor Sb04g026480 I
Sb06g022660 Sorghum bicolor Sb06g022660 I
Sb06g027180 Sorghum bicolor Sb06g027180 I
Si010384m.g Setaria italica Si010384m.g I
Si010814m.g Setaria italica Si010814m.g I
Si017704m.g Setaria italica Si017704m.g I
Si018182m.g Setaria italica Si018182m.g I
Solyc03g005570.2 Solanum lycopersicum Solyc03g005570.2 I
Solyc05g055030.1 Solanum lycopersicum Solyc05g055030.1 I
Solyc06g053610.2 Solanum lycopersicum Solyc06g053610.2 I
Solyc09g090130.2 Solanum lycopersicum Solyc09g090130.2 I
Solyc10g005550.1 Solanum lycopersicum Solyc10g005550.1 I
TCM_004046 Theobroma cacao TCM_004046 I
TCM_020889 Theobroma cacao TCM_020889 I
TCM_026197 Theobroma cacao TCM_026197 I
TCM_032927 Theobroma cacao TCM_032927 I
Thhalv10008436m.g Eutrema salsugineum Thhalv10008436m.g I
Thhalv10008531m.g Eutrema salsugineum Thhalv10008531m.g I
Thhalv10012163m.g Eutrema salsugineum Thhalv10012163m.g I
Thhalv10017136m.g Eutrema salsugineum Thhalv10017136m.g I
Thhalv10021926m.g Eutrema salsugineum Thhalv10021926m.g I
Thhalv10022110m.g Eutrema salsugineum Thhalv10022110m.g I
Traes_2AL_CC403D182 Triticum aestivum Traes_2AL_CC403D182 I
Traes_2BL_FD8C2F815 Triticum aestivum Traes_2BL_FD8C2F815 I
Traes_2DL_54E6F0446 Triticum aestivum Traes_2DL_54E6F0446 I
Traes_2DL_7183519F8 Triticum aestivum Traes_2DL_7183519F8 I
Traes_2DL_D39684C41 Triticum aestivum Traes_2DL_D39684C41 I
Traes_6AL_54D562BC2 Triticum aestivum Traes_6AL_54D562BC2 I
Traes_6AL_BB730675A Triticum aestivum Traes_6AL_BB730675A I
Traes_6AL_E1D3D8DAA1 Triticum aestivum Traes_6AL_E1D3D8DAA1 I
Traes_6BL_E5A9546C9 Triticum aestivum Traes_6BL_E5A9546C9 I
Traes_6DL_67FD04DA0 Triticum aestivum Traes_6DL_67FD04DA0 N
Traes_6DL_991931CF9 Triticum aestivum Traes_6DL_991931CF9 I
Traes_6DL_BBAC725C3 Triticum aestivum Traes_6DL_BBAC725C3 I
Traes_6DL_FCDEB9A8B Triticum aestivum Traes_6DL_FCDEB9A8B I
TRIUR3_12301 Triticum urartu TRIUR3_12301 I
TRIUR3_12302 Triticum urartu TRIUR3_12302 I
TRIUR3_18702 Triticum urartu TRIUR3_18702 I
VIT_05s0049g01010 Vitis vinifera VIT_05s0049g01010 I
VIT_05s0049g01020 Vitis vinifera VIT_05s0049g01020 I
VIT_07s0005g03340 Vitis vinifera VIT_07s0005g03340 I
VIT_19s0085g00050 Vitis vinifera VIT_19s0085g00050 I