Scas_Contig664.15 (Saccharomyces castellii)
GCR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF12550 (GCR1_C) IPR022210 Scas_Contig664.15 T198726_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
GCR1
M00914_2.00
Saccharomyces cerevisiae
RGVDDCBWVW

WBWVGHHBCY
PBM
Gordan et al.(2011)
Gcr1
0.873 0.873
GCR1
M08569_2.00
Saccharomyces cerevisiae
VCTTCCH

DGGAAGB
Misc
DeBoer et al.(2011)
YPL075W_2071
0.873 0.873
GCR1
M10606_2.00
Saccharomyces cerevisiae
RKCTTCCWS

SWGGAAGYY
Transfac
Matys et al.(2006)
F$GCR1_01
0.873 0.873
GCR1
M10607_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$GCR1_B
0.873 0.873
GCR1
M10608_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$GCR1_Q4
0.873 0.873
GCR1
M08456_2.00
Saccharomyces cerevisiae
RKCTTCCW

WGGAAGMY
COMPILED
Mathelier et al.(2014)
MA0304.1
0.873 0.873
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig664.15 GCR1 825 916

Links

Other GCR1 family TFs
Other Saccharomyces castellii TFs

Invalid Input OrderBy

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action