Scas_Contig664.15 (Saccharomyces castellii)
GCR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF12550 (GCR1_C) IPR022210 Scas_Contig664.15 T198726_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GCR1
M00914_2.00 		Saccharomyces cerevisiae
RGVDDCBWVW
WBWVGHHBCY		 PBM
Gordan et al.(2011)
Gcr1 		0.873 0.873
GCR1
M08569_2.00 		Saccharomyces cerevisiae
VCTTCCH
DGGAAGB		 Misc
DeBoer et al.(2011)
YPL075W_2071 		0.873 0.873
GCR1
M10606_2.00 		Saccharomyces cerevisiae
RKCTTCCWS
SWGGAAGYY		 Transfac
Matys et al.(2006)
F$GCR1_01 		0.873 0.873
GCR1
M10607_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$GCR1_B 		0.873 0.873
GCR1
M10608_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$GCR1_Q4 		0.873 0.873
GCR1
M08456_2.00 		Saccharomyces cerevisiae
RKCTTCCW
WGGAAGMY		 COMPILED
Mathelier et al.(2014)
MA0304.1 		0.873 0.873
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig664.15 GCR1 825 916

Links

Other GCR1 family TFs
Other Saccharomyces castellii TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0C02090 Naumovozyma castellii NCAS_0C02090 I 1.000
NDAI_0E02800 Naumovozyma dairenensis NDAI_0E02800 I 0.911
GCR1 Saccharomyces cerevisiae YPL075W D 0.873
22012_YPL075W Saccharomyces mikatae 22012_YPL075W I 0.873
22618_YPL075W Saccharomyces paradoxus 22618_YPL075W I 0.873
SKUD_192107 Saccharomyces kudriavzevii SKUD_192107 I 0.873
KAFR_0E00910 Kazachstania africana KAFR_0E00910 I 0.861
KNAG_0A01950 Kazachstania naganishii KNAG_0A01950 I 0.848
TDEL_0B03030 Torulaspora delbrueckii TDEL_0B03030 I 0.835
ZYRO0D03916g Zygosaccharomyces rouxii ZYRO0D03916g I 0.823
ZBAI_07289 Zygosaccharomyces bailii ZBAI_07289 I 0.810
CAGL0H05379g Candida glabrata CAGL0H05379g I 0.810
ZBAI_01205 Zygosaccharomyces bailii ZBAI_01205 I 0.810
SAKL0H10010g Lachancea kluyveri SAKL0H10010g I 0.810
Kpol_1048p60 Vanderwaltozyma polyspora Kpol_1048p60 I 0.797
Kwal_12044 Kluyveromyces waltii Kwal_12044 I 0.785
KLTH0E12584g Kluyveromyces thermotolerans KLTH0E12584g I 0.772
TPHA_0I01890 Tetrapisispora phaffii TPHA_0I01890 I 0.772
KLTH0E12584g Lachancea thermotolerans KLTH0E12584g I 0.772
Ecym_7037 Eremothecium cymbalariae Ecym_7037 I 0.747
LALA0_S04e03466g Lachancea lanzarotensis LALA0_S04e03466g I 0.747
AACERI_AaceriAEL245W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAEL245W I 0.734
KLLA0_E23431g Kluyveromyces lactis KLLA0_E23431g I 0.734
TBLA_0B04590 Tetrapisispora blattae TBLA_0B04590 I 0.722
AGOS_AEL245W Ashbya gossypii AGOS_AEL245W I 0.709