Grhl1 (Rattus norvegicus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSRNOG00000054989 T199219_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.847 0.847
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.847 0.847
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.847 0.847
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.847 0.847
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.847 0.847
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000068887 Grainyhead 135 349

Links

Other Grainyhead family TFs
Other Rattus norvegicus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0001885601 Ascaris lumbricoides ALUE_0001885601 N 0.000
ANCCEY_01474 Ancylostoma ceylanicum ANCCEY_01474 N 0.000
ASU_15182 Ascaris suum ASU_15182 N 0.000
Bm6550 Brugia malayi Bm6550 N 0.000
CBG05690 Caenorhabditis briggsae CBG05690 N 0.000
CRE06043 Caenorhabditis remanei CRE06043 N 0.000
DME_0000028701 Dracunculus medinensis DME_0000028701 N 0.000
EEL_0000847601 Elaeophora elaphi EEL_0000847601 N 0.000
EVEC_0001283901 Enterobius vermicularis EVEC_0001283901 N 0.000
Hba_18486 Heterorhabditis bacteriophora Hba_18486 N 0.000
HPLM_0001382501 Haemonchus placei HPLM_0001382501 N 0.000
L889_g14208 Steinernema feltiae L889_g14208 N 0.000
L892_g27879 Steinernema scapterisci L892_g27879 I 0.000
LOAG_13296 Loa loa LOAG_13296 N 0.000
NBR_0000071001 Nippostrongylus brasiliensis NBR_0000071001 N 0.000
PTRK_0001116100 Parastrongyloides trichosuri PTRK_0001116100 N 0.000
RSKR_0000247700 Rhabditophanes kr3021 RSKR_0000247700 N 0.000
SMUV_0000467601 Syphacia muris SMUV_0000467601 N 0.000
SMUV_0001103601 Syphacia muris SMUV_0001103601 N 0.000
SPAL_0001355700 Strongyloides papillosus SPAL_0001355700 N 0.000
SSTP_0000731600 Strongyloides stercoralis SSTP_0000731600 N 0.000
SSTP_0000839900 Strongyloides stercoralis SSTP_0000839900 N 0.000
TCLT_0000242201 Thelazia callipaeda TCLT_0000242201 N 0.000
TCNE_0001625401 Toxocara canis TCNE_0001625401 N 0.000
dmd-3 Caenorhabditis elegans WBGene00012832 D 0.000
WBGene00242840 Onchocerca volvulus WBGene00242840 N 0.000