Alligator_sinensis_CCG001515.1 (Alligator sinensis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Alligator_sinensis_CCG001515.1 T199500_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.942 0.942
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.942 0.942
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.942 0.942
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.918 0.918
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.918 0.918
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.918 0.918
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.851 0.851
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.745 0.745
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.745 0.745
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.745 0.745
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.745 0.745
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG001515.1 Grainyhead 32 246

Links

Other Grainyhead family TFs
Other Alligator sinensis TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003375 Calypte anna Aan_R003375 N
Aan_R005281 Calypte anna Aan_R005281 N
Aan_R015818 Calypte anna Aan_R015818 N
Afo_R009642 Aptenodytes forsteri Afo_R009642 N
Afo_R016009 Aptenodytes forsteri Afo_R016009 N
Alligator_sinensis_CCG001718.1 Alligator sinensis Alligator_sinensis_CCG001718.1 N
Alligator_sinensis_CCG003320.1 Alligator sinensis Alligator_sinensis_CCG003320.1 N
Alligator_sinensis_CCG006442.1 Alligator sinensis Alligator_sinensis_CCG006442.1 N
Brh_R007234 Buceros rhinoceros Brh_R007234 N
Brh_R013079 Buceros rhinoceros Brh_R013079 N
Brh_R013831 Buceros rhinoceros Brh_R013831 N
Cmyd_10014727 Chelonia mydas Cmyd_10014727 N
Cmyd_10017465 Chelonia mydas Cmyd_10017465 N
TSHZ1 Anolis carolinensis ENSACAG00000005329 N
TSHZ3 Anolis carolinensis ENSACAG00000012280 N
TSHZ2 Anolis carolinensis ENSACAG00000012691 N
ENSAMEG00000009733 Ailuropoda melanoleuca ENSAMEG00000009733 N
ENSAMEG00000013234 Ailuropoda melanoleuca ENSAMEG00000013234 N
ENSAMEG00000018999 Ailuropoda melanoleuca ENSAMEG00000018999 N
ENSAMXG00000001175 Astyanax mexicanus ENSAMXG00000001175 N
ENSAMXG00000006284 Astyanax mexicanus ENSAMXG00000006284 N
ENSAPLG00000011554 Anas platyrhynchos ENSAPLG00000011554 N
ENSAPLG00000011634 Anas platyrhynchos ENSAPLG00000011634 N
ENSAPLG00000015100 Anas platyrhynchos ENSAPLG00000015100 N
TSHZ1 Bos taurus ENSBTAG00000000422 N
TSHZ3 Bos taurus ENSBTAG00000002687 N
TSHZ2 Bos taurus ENSBTAG00000007917 N
ENSBTAP00000033821-D1 Bos grunniens ENSBTAP00000033821-D1 N
TSHZ1 Canis familiaris ENSCAFG00000000020 N
TSHZ3 Canis familiaris ENSCAFG00000007592 N
TSHZ2 Canis familiaris ENSCAFG00000011808 N
TSHZ2 Callithrix jacchus ENSCJAG00000000609 N
TSHZ1 Callithrix jacchus ENSCJAG00000003224 N
TSHZ3 Callithrix jacchus ENSCJAG00000018374 N
TSHZ2 Cavia porcellus ENSCPOG00000002986 N
TSHZ3 Cavia porcellus ENSCPOG00000003591 N
TSHZ1 Cavia porcellus ENSCPOG00000009072 N
ENSCSAG00000018510 Chlorocebus sabaeus ENSCSAG00000018510 N
ENSCSAG00000018744 Chlorocebus sabaeus ENSCSAG00000018744 N
ENSCSAG00000019504 Chlorocebus sabaeus ENSCSAG00000019504 N
tshz2 Danio rerio ENSDARG00000079201 N
tshz3b Danio rerio ENSDARG00000103361 N
TSHZ3 Dasypus novemcinctus ENSDNOG00000013222 N
TSHZ1 Dasypus novemcinctus ENSDNOG00000033317 N
TSHZ2 Dasypus novemcinctus ENSDNOG00000034743 N
ENSDORG00000015686 Dipodomys ordii ENSDORG00000015686 N
TSHZ1 Equus caballus ENSECAG00000002955 N
TSHZ3 Equus caballus ENSECAG00000016274 N
TSHZ2 Erinaceus europaeus ENSEEUG00000000596 N
TSHZ1 Erinaceus europaeus ENSEEUG00000001038 N
TSHZ3 Erinaceus europaeus ENSEEUG00000004335 N
TSHZ1 Echinops telfairi ENSETEG00000004530 N
TSHZ2 Echinops telfairi ENSETEG00000011541 N
ENSFALG00000004672 Ficedula albicollis ENSFALG00000004672 N
ENSFALG00000013173 Ficedula albicollis ENSFALG00000013173 N
ENSFALG00000014186 Ficedula albicollis ENSFALG00000014186 N
TSHZ3 Felis catus ENSFCAG00000004896 N
TSHZ2 Felis catus ENSFCAG00000014616 N
TSHZ3 Homo sapiens ENSG00000121297 N
TSHZ1 Homo sapiens ENSG00000179981 N
TSHZ2 Homo sapiens ENSG00000182463 N
tshz2 Gasterosteus aculeatus ENSGACG00000011135 N
TSHZ3 Gallus gallus ENSGALG00000004528 N
TSHZ2 Gallus gallus ENSGALG00000007809 N
TSHZ1 Gallus gallus ENSGALG00000013672 N
TSHZ3 Gorilla gorilla ENSGGOG00000003676 N
TSHZ2 Gorilla gorilla ENSGGOG00000005282 N
ENSGMOG00000000298 Gadus morhua ENSGMOG00000000298 N
ENSLACG00000011012 Latimeria chalumnae ENSLACG00000011012 N
ENSLACG00000012913 Latimeria chalumnae ENSLACG00000012913 N
ENSLACG00000015505 Latimeria chalumnae ENSLACG00000015505 N
TSHZ3 Loxodonta africana ENSLAFG00000000905 N
TSHZ2 Loxodonta africana ENSLAFG00000002942 N
TSHZ1 Loxodonta africana ENSLAFG00000027654 N
ENSLOCG00000002451 Lepisosteus oculatus ENSLOCG00000002451 N
ENSLOCG00000005747 Lepisosteus oculatus ENSLOCG00000005747 N
ENSMEUG00000008737 Macropus eugenii ENSMEUG00000008737 N
TSHZ1 Meleagris gallopavo ENSMGAG00000008114 N
TSHZ2 Meleagris gallopavo ENSMGAG00000015562 N
TSHZ3 Meleagris gallopavo ENSMGAG00000015601 N
ENSMICG00000004609 Microcebus murinus ENSMICG00000004609 N
TSHZ1 Microcebus murinus ENSMICG00000013601 N
TSHZ1 Myotis lucifugus ENSMLUG00000000305 N
TSHZ2 Myotis lucifugus ENSMLUG00000013960 N
TSHZ3 Myotis lucifugus ENSMLUG00000029075 N
TSHZ2 Macaca mulatta ENSMMUG00000013035 N
TSHZ3 Macaca mulatta ENSMMUG00000014028 N
TSHZ1 Macaca mulatta ENSMMUG00000014916 N
TSHZ1 Monodelphis domestica ENSMODG00000012317 N
TSHZ3 Monodelphis domestica ENSMODG00000012390 N
TSHZ2 Monodelphis domestica ENSMODG00000016391 N
ENSMPUG00000007986 Mustela putorius furo ENSMPUG00000007986 N
ENSMPUG00000020171 Mustela putorius furo ENSMPUG00000020171 N
Tshz3 Mus musculus ENSMUSG00000021217 N
Tshz1 Mus musculus ENSMUSG00000046982 N
Tshz2 Mus musculus ENSMUSG00000047907 N
ENSNLEG00000007016 Nomascus leucogenys ENSNLEG00000007016 N
ENSNLEG00000007608 Nomascus leucogenys ENSNLEG00000007608 N
ENSNLEG00000018459 Nomascus leucogenys ENSNLEG00000018459 N
TSHZ1 Ornithorhynchus anatinus ENSOANG00000001135 N
TSHZ3 Ornithorhynchus anatinus ENSOANG00000002785 N
TSHZ2 Ornithorhynchus anatinus ENSOANG00000003138 N
ENSOARG00000004125 Ovis aries ENSOARG00000004125 N
ENSOARG00000004555 Ovis aries ENSOARG00000004555 N
ENSOARG00000014918 Ovis aries ENSOARG00000014918 N
TSHZ2 Oryctolagus cuniculus ENSOCUG00000002587 N
TSHZ1 Oryctolagus cuniculus ENSOCUG00000008235 N
TSHZ3 Oryctolagus cuniculus ENSOCUG00000015902 N
TSHZ1 Otolemur garnettii ENSOGAG00000007341 N
TSHZ2 Otolemur garnettii ENSOGAG00000008544 N
TSHZ3 Otolemur garnettii ENSOGAG00000032636 N
ENSONIG00000003518 Oreochromis niloticus ENSONIG00000003518 N
ENSONIG00000010423 Oreochromis niloticus ENSONIG00000010423 N
ENSONIG00000016558 Oreochromis niloticus ENSONIG00000016558 N
TSHZ3 Ochotona princeps ENSOPRG00000010680 N
tshz3b Oryzias latipes ENSORLG00000015489 N
tshz2 Oryzias latipes ENSORLG00000016111 N
ENSORLG00000016193 Oryzias latipes ENSORLG00000016193 N
ENSP00000240587 Macaca fascicularis ENSP00000240587 N
ENSP00000240587-D1 Bos grunniens ENSP00000240587-D1 N
ENSP00000240587-D2 Bos grunniens ENSP00000240587-D2 N
ENSP00000323584 Macaca fascicularis ENSP00000323584 N
ENSP00000360552 Macaca fascicularis ENSP00000360552 N
ENSPANG00000000181 Papio anubis ENSPANG00000000181 N
ENSPANG00000001076 Papio anubis ENSPANG00000001076 N
ENSPANG00000003945 Papio anubis ENSPANG00000003945 N
TSHZ3 Procavia capensis ENSPCAG00000011413 N
TSHZ1 Procavia capensis ENSPCAG00000013873 N
ENSPFOG00000001207 Poecilia formosa ENSPFOG00000001207 N
ENSPFOG00000003829 Poecilia formosa ENSPFOG00000003829 N
ENSPFOG00000005562 Poecilia formosa ENSPFOG00000005562 N
ENSPFOG00000020779 Poecilia formosa ENSPFOG00000020779 N
ENSPPYG00000009248 Pongo abelii ENSPPYG00000009248 N
ENSPPYG00000009813 Pongo abelii ENSPPYG00000009813 N
ENSPSIG00000007188 Pelodiscus sinensis ENSPSIG00000007188 N
ENSPSIG00000007559 Pelodiscus sinensis ENSPSIG00000007559 N
TSHZ1 Pan troglodytes ENSPTRG00000010120 N
TSHZ3 Pan troglodytes ENSPTRG00000010788 N
TSHZ2 Pan troglodytes ENSPTRG00000013634 N
TSHZ2 Pteropus vampyrus ENSPVAG00000001894 N
Tshz3 Rattus norvegicus ENSRNOG00000013938 N
Tshz1 Rattus norvegicus ENSRNOG00000016246 N
Tshz2 Rattus norvegicus ENSRNOG00000048433 N
ENSSHAG00000006124 Sarcophilus harrisii ENSSHAG00000006124 N
ENSSHAG00000015362 Sarcophilus harrisii ENSSHAG00000015362 N
TSHZ1 Sus scrofa ENSSSCG00000004861 N
ENSSSCG00000007482 Sus scrofa ENSSSCG00000007482 N
TSHZ3 Sus scrofa ENSSSCG00000025214 N
ENSSTOG00000008373 Ictidomys tridecemlineatus ENSSTOG00000008373 N
ENSSTOG00000019384 Ictidomys tridecemlineatus ENSSTOG00000019384 N
ENSSTOG00000024242 Ictidomys tridecemlineatus ENSSTOG00000024242 N
TSHZ2 Tupaia belangeri ENSTBEG00000015472 N
TSHZ2 Taeniopygia guttata ENSTGUG00000008551 N
TSHZ3 Taeniopygia guttata ENSTGUG00000009016 N
TSHZ1 Taeniopygia guttata ENSTGUG00000009111 N
tshz3b Tetraodon nigroviridis ENSTNIG00000004737 N
ENSTNIG00000008370 Tetraodon nigroviridis ENSTNIG00000008370 N
tshz2 Tetraodon nigroviridis ENSTNIG00000012458 N
tshz3b Takifugu rubripes ENSTRUG00000005330 N
ENSTRUG00000006028 Takifugu rubripes ENSTRUG00000006028 N
tshz2 Takifugu rubripes ENSTRUG00000007670 N
ENSTSYG00000005762 Tarsius syrichta ENSTSYG00000005762 N
TSHZ2 Tursiops truncatus ENSTTRG00000005801 N
TSHZ3 Tursiops truncatus ENSTTRG00000007910 N
TSHZ1 Tursiops truncatus ENSTTRG00000017219 N
TSHZ2 Vicugna pacos ENSVPAG00000009638 N
ENSXMAG00000000992 Xiphophorus maculatus ENSXMAG00000000992 N
ENSXMAG00000012685 Xiphophorus maculatus ENSXMAG00000012685 N
ENSXMAG00000019156 Xiphophorus maculatus ENSXMAG00000019156 N
Gfo_R006219 Geospiza fortis Gfo_R006219 N
Gfo_R009586 Geospiza fortis Gfo_R009586 N
Gfo_R015098 Geospiza fortis Gfo_R015098 N
Myotis_brandtii_TSHZ1_10034198 Myotis brandtii Myotis_brandtii_TSHZ1_10034198 N
Myotis_brandtii_TSHZ2_10026337 Myotis brandtii Myotis_brandtii_TSHZ2_10026337 N
Myotis_brandtii_TSHZ3_10009571 Myotis brandtii Myotis_brandtii_TSHZ3_10009571 N
Ogr08975 Ophisaurus gracilis Ogr08975 N
Ogr09581 Ophisaurus gracilis Ogr09581 N
Ogr14572 Ophisaurus gracilis Ogr14572 N
Pvit_03347 Pogona vitticeps Pvit_03347 N
Pvit_07582 Pogona vitticeps Pvit_07582 N
Pvit_14639 Pogona vitticeps Pvit_14639 N
Tal_R000655 Tyto alba Tal_R000655 N
Tal_R010116 Tyto alba Tal_R010116 N
Tal_R012305 Tyto alba Tal_R012305 N
tshz2 Xenopus tropicalis XB-GENE-486894 N
tshz1.L Xenopus laevis XB-GENE-6461981 N
tshz1.S Xenopus laevis XB-GENE-6465500 N
tshz3.L Xenopus laevis XB-GENE-866446 N
XP_002934421 Xenopus tropicalis XP_002934421 N