CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TFCP2L1
(
Homo sapiens
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSG00000115112
T199006_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in regulation of transcription by RNA polymerase II. Predicted to be located in cytoplasm and membrane. Predicted to be part of chromatin. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFCP2L1
M04885_2.00
Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX
(Direct)
(Direct)
TFCP2L1
M04886_2.00
Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX
(Direct)
(Direct)
TFCP2L1
M10609_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP9_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tcfcp2l1
M08029_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1
0.962
0.962
Tcfcp2l1
M08030_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1
0.962
0.962
Tcfcp2l1
M09127_2.00
Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH
Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C
0.962
0.962
ENSGALG00000002235
M02030_2.00
Gallus gallus
AACCGGTTA
TAACCGGTT
PBM
Weirauch et al.(2014)
pTH8565
0.847
0.847
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
0.770
0.770
UBP1
M10614_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
0.770
0.770
UBP1
M10615_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
0.770
0.770
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
0.770
0.770
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000263707
Grainyhead
25
240
ALPIFKQEEPQLSPENEARLPPLQYVLCAATSPAVKLHEETLTYLNQGQSYEIRLLENRKLGDFQDLNTKYVKSIIRVVFHDRRLQYTEHQQLEGWRWSRPGDRILDIDIPLSVGILDPRASPTQLNAVEFLWDPAKRASAFIQVHCISTEFTPRKHGGEKGVPFRVQIDTFKQNENGEYTEHLHSASCQIKVFKPKGADRKQKTDREKMEKRTAQ
Links
Other
Grainyhead
family TFs
Other
Homo sapiens
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TFCP2L1
Gorilla gorilla
ENSGGOG00000001680
I
1.000
ENSPANG00000016702
Papio anubis
ENSPANG00000016702
I
1.000
ENSPPYG00000012777
Pongo abelii
ENSPPYG00000012777
I
1.000
ENSCSAG00000016679
Chlorocebus sabaeus
ENSCSAG00000016679
I
1.000
TFCP2L1
Otolemur garnettii
ENSOGAG00000012031
I
1.000
TFCP2L1
Oryctolagus cuniculus
ENSOCUG00000006877
I
0.995
TFCP2L1
Pan troglodytes
ENSPTRG00000012415
I
0.990
TFCP2L1
Callithrix jacchus
ENSCJAG00000013356
I
0.986
ENSNLEG00000000988
Nomascus leucogenys
ENSNLEG00000000988
I
0.986
TFCP2L1
Canis familiaris
ENSCAFG00000004788
I
0.986
ENSOARG00000013124
Ovis aries
ENSOARG00000013124
I
0.986
TFCP2L1
Monodelphis domestica
ENSMODG00000000229
I
0.986
ENSSHAG00000013877
Sarcophilus harrisii
ENSSHAG00000013877
I
0.986
TFCP2L1
Microcebus murinus
ENSMICG00000007161
I
0.986
TFCP2L1
Sus scrofa
ENSSSCG00000015732
I
0.986
TFCP2L1
Loxodonta africana
ENSLAFG00000006873
I
0.986
ENSAMEG00000005284
Ailuropoda melanoleuca
ENSAMEG00000005284
I
0.981
Tfcp2l1
Rattus norvegicus
ENSRNOG00000002414
I
0.981
ENSTSYG00000013882
Tarsius syrichta
ENSTSYG00000013882
I
0.981
TFCP2L1
Bos taurus
ENSBTAG00000007765
I
0.981
TFCP2L1
Felis catus
ENSFCAG00000012143
I
0.981
TFCP2L1
Cavia porcellus
ENSCPOG00000011523
I
0.976
ENSP00000263707-D1
Bos grunniens
ENSP00000263707-D1
I
0.976
ENSSTOG00000013080
Ictidomys tridecemlineatus
ENSSTOG00000013080
I
0.971
TFCP2L1
Ornithorhynchus anatinus
ENSOANG00000007591
I
0.971
TFCP2L1
Equus caballus
ENSECAG00000024837
I
0.967
Tcfcp2l1
Mus musculus
ENSMUSG00000026380
D
0.962
TFCP2L1
Gallus gallus
ENSGALG00000011635
I
0.962
Myotis_brandtii_TFCP2L1_10019079
Myotis brandtii
Myotis_brandtii_TFCP2L1_10019079
I
0.957
ENSFALG00000013230
Ficedula albicollis
ENSFALG00000013230
I
0.957
ENSAPLG00000015648
Anas platyrhynchos
ENSAPLG00000015648
I
0.957
Brh_R004848
Buceros rhinoceros
Brh_R004848
I
0.956
Afo_R006827
Aptenodytes forsteri
Afo_R006827
I
0.956
Aan_R003641
Calypte anna
Aan_R003641
I
0.956
Tal_R011103
Tyto alba
Tal_R011103
I
0.956
TFCP2L1
Meleagris gallopavo
ENSMGAG00000011889
I
0.952
ENSPSIG00000008408
Pelodiscus sinensis
ENSPSIG00000008408
I
0.952
Gfo_R001211
Geospiza fortis
Gfo_R001211
I
0.947
TFCP2L1
Anolis carolinensis
ENSACAG00000004268
I
0.947
Cmyd_10009085
Chelonia mydas
Cmyd_10009085
I
0.943
Alligator_sinensis_CCG001515.1
Alligator sinensis
Alligator_sinensis_CCG001515.1
I
0.938
TFCP2L1
Taeniopygia guttata
ENSTGUG00000004573
I
0.938
TFCP2L1
Macaca mulatta
ENSMMUG00000008829
I
0.938
Pvit_06471
Pogona vitticeps
Pvit_06471
I
0.938
tfcp2l1.S
Xenopus laevis
XB-GENE-6255174
I
0.913
tfcp2l1.L
Xenopus laevis
XB-GENE-997202
I
0.900
ENSMPUG00000001036
Mustela putorius furo
ENSMPUG00000001036
I
0.890
ENSPMAG00000007229
Petromyzon marinus
ENSPMAG00000007229
I
0.871
TFCP2L1
Erinaceus europaeus
ENSEEUG00000011003
I
0.859
TFCP2L1
Myotis lucifugus
ENSMLUG00000002967
I
0.856
TFCP2
Otolemur garnettii
ENSOGAG00000007969
I
0.852
TFCP2
Loxodonta africana
ENSLAFG00000009123
I
0.852
TFCP2
Macaca mulatta
ENSMMUG00000000152
I
0.852
ENSPANG00000019744
Papio anubis
ENSPANG00000019744
I
0.852
TFCP2
Felis catus
ENSFCAG00000030292
I
0.852
ENSNLEG00000017779
Nomascus leucogenys
ENSNLEG00000017779
I
0.852
Pvit_07455
Pogona vitticeps
Pvit_07455
I
0.852
ENSPPYG00000004522
Pongo abelii
ENSPPYG00000004522
I
0.852
ENSAMEG00000002108
Ailuropoda melanoleuca
ENSAMEG00000002108
I
0.852
TFCP2
Equus caballus
ENSECAG00000020650
I
0.852
TFCP2
Callithrix jacchus
ENSCJAG00000017599
I
0.852
TFCP2
Pan troglodytes
ENSPTRG00000004949
I
0.852
TFCP2
Canis familiaris
ENSCAFG00000007831
I
0.852
ENSCSAG00000005909
Chlorocebus sabaeus
ENSCSAG00000005909
I
0.852
TFCP2
Homo sapiens
ENSG00000135457
D
0.852
TFCP2
Myotis lucifugus
ENSMLUG00000013918
I
0.847
TFCP2
Anolis carolinensis
ENSACAG00000012289
I
0.847
ENSSHAG00000000901
Sarcophilus harrisii
ENSSHAG00000000901
I
0.847
ENSGALG00000002235
Gallus gallus
ENSGALG00000002235
D
0.847
TFCP2
Bos taurus
ENSBTAG00000019312
I
0.847
ENSP00000283628-D2
Bos grunniens
ENSP00000283628-D2
I
0.847
ENSTGUG00000015251
Taeniopygia guttata
ENSTGUG00000015251
I
0.845
Tfcp2
Rattus norvegicus
ENSRNOG00000032395
I
0.843
Myotis_brandtii_TFCP2_10023086
Myotis brandtii
Myotis_brandtii_TFCP2_10023086
I
0.842
TFCP2L1
Tursiops truncatus
ENSTTRG00000003387
I
0.842
ENSOARG00000017390
Ovis aries
ENSOARG00000017390
I
0.842
TFCP2
Tursiops truncatus
ENSTTRG00000013836
I
0.839
ENSLACG00000017694
Latimeria chalumnae
ENSLACG00000017694
I
0.837
Tal_R010177
Tyto alba
Tal_R010177
I
0.837
Aan_R009566
Calypte anna
Aan_R009566
I
0.837
Tfcp2
Mus musculus
ENSMUSG00000009733
I
0.837
TFCP2
Vicugna pacos
ENSVPAG00000007617
I
0.837
TFCP2
Ochotona princeps
ENSOPRG00000005747
I
0.834
Cmyd_10002729
Chelonia mydas
Cmyd_10002729
I
0.833
Pvit_12019
Pogona vitticeps
Pvit_12019
I
0.832
Gfo_R015659
Geospiza fortis
Gfo_R015659
I
0.829
pou6f1
Takifugu rubripes
ENSTRUG00000014900
I
0.823
tfcp2
Gasterosteus aculeatus
ENSGACG00000010929
I
0.823
Tfcp2l1
Dipodomys ordii
ENSDORG00000004265
I
0.822
tfcp2
Danio rerio
ENSDARG00000060306
I
0.818
ENSAMXG00000016608
Astyanax mexicanus
ENSAMXG00000016608
I
0.818
Ogr17000
Ophisaurus gracilis
Ogr17000
I
0.818
tfcp2
Oryzias latipes
ENSORLG00000015644
I
0.813
ENSPMAG00000003474
Petromyzon marinus
ENSPMAG00000003474
I
0.813
ENSLOCG00000004816
Lepisosteus oculatus
ENSLOCG00000004816
I
0.812
Myotis_brandtii_UBP1_10023937
Myotis brandtii
Myotis_brandtii_UBP1_10023937
I
0.809
UBP1
Sus scrofa
ENSSSCG00000011235
I
0.809
ENSONIG00000016680
Oreochromis niloticus
ENSONIG00000016680
I
0.809
ENSDNOG00000019550
Dasypus novemcinctus
ENSDNOG00000019550
I
0.809
ENSLAFG00000030783
Loxodonta africana
ENSLAFG00000030783
I
0.809
UBP1
Felis catus
ENSFCAG00000006123
I
0.809
UBP1
Equus caballus
ENSECAG00000018555
I
0.809
UBP1
Echinops telfairi
ENSETEG00000016510
I
0.808
UBP1
Procavia capensis
ENSPCAG00000008237
I
0.808
tfcp2
Xenopus tropicalis
XB-GENE-485720
I
0.805
UBP1
Meleagris gallopavo
ENSMGAG00000011814
I
0.804
ENSP00000283628-D1
Bos grunniens
ENSP00000283628-D1
I
0.804
UBP1
Tursiops truncatus
ENSTTRG00000016791
I
0.803
ENSDNOG00000017309
Dasypus novemcinctus
ENSDNOG00000017309
I
0.801
Ubp1
Dipodomys ordii
ENSDORG00000010133
I
0.799
UBP1
Sorex araneus
ENSSARG00000008670
I
0.799
ubp1
Tetraodon nigroviridis
ENSTNIG00000016974
I
0.799
ENSXMAG00000005202
Xiphophorus maculatus
ENSXMAG00000005202
I
0.799
tfcp2.L
Xenopus laevis
XB-GENE-865546
I
0.795
ENSGMOG00000007483
Gadus morhua
ENSGMOG00000007483
I
0.794
ENSSTOG00000009123
Ictidomys tridecemlineatus
ENSSTOG00000009123
I
0.794
ENSP00000257915
Macaca fascicularis
ENSP00000257915
I
0.794
AAI06326
Xenopus laevis
AAI06326
I
0.794
ubp1
Oryzias latipes
ENSORLG00000011706
I
0.794
ENSOARG00000015881
Ovis aries
ENSOARG00000015881
I
0.794
ENSPSIG00000015527
Pelodiscus sinensis
ENSPSIG00000015527
I
0.793
TFCP2
Pteropus vampyrus
ENSPVAG00000014772
I
0.790
AAP78771
Xenopus laevis
AAP78771
I
0.790
ENSPSIG00000003763
Pelodiscus sinensis
ENSPSIG00000003763
I
0.790
ENSPFOG00000011621
Poecilia formosa
ENSPFOG00000011621
I
0.789
ENSAPLG00000012157
Anas platyrhynchos
ENSAPLG00000012157
I
0.789
ENSXMAG00000003023
Xiphophorus maculatus
ENSXMAG00000003023
I
0.789
Afo_R010616
Aptenodytes forsteri
Afo_R010616
I
0.789
TFCP2L1
Pteropus vampyrus
ENSPVAG00000001653
I
0.789
Alligator_sinensis_CCG015050.1
Alligator sinensis
Alligator_sinensis_CCG015050.1
I
0.785
ENSMODG00000002605
Monodelphis domestica
ENSMODG00000002605
I
0.785
TFCP2
Cavia porcellus
ENSCPOG00000007923
I
0.785
ENSLACG00000012609
Latimeria chalumnae
ENSLACG00000012609
I
0.781
ubp1
Takifugu rubripes
ENSTRUG00000013570
I
0.781
ENSLOCG00000002070
Lepisosteus oculatus
ENSLOCG00000002070
I
0.780
ENSPFOG00000008378
Poecilia formosa
ENSPFOG00000008378
I
0.780
ENSDNOG00000018905
Dasypus novemcinctus
ENSDNOG00000018905
I
0.780
ENSLACG00000000718
Latimeria chalumnae
ENSLACG00000000718
I
0.779
Alligator_sinensis_CCG001336.1
Alligator sinensis
Alligator_sinensis_CCG001336.1
I
0.777
ubp1
Danio rerio
ENSDARG00000018000
I
0.775
Ubp1
Rattus norvegicus
ENSRNOG00000009729
I
0.770
ENSSHAG00000002389
Sarcophilus harrisii
ENSSHAG00000002389
I
0.770
UBP1
Homo sapiens
ENSG00000153560
D
0.770
Ubp1
Mus musculus
ENSMUSG00000009741
I
0.770
tfcp2
Tetraodon nigroviridis
ENSTNIG00000012528
I
0.770
ENSMPUG00000013008
Mustela putorius furo
ENSMPUG00000013008
I
0.769
ENSAMEG00000002341
Ailuropoda melanoleuca
ENSAMEG00000002341
I
0.769
UBP1
Canis familiaris
ENSCAFG00000004598
I
0.769
UBP1
Myotis lucifugus
ENSMLUG00000010827
I
0.766
UBP1
Pan troglodytes
ENSPTRG00000014733
I
0.766
ENSLOCG00000002718
Lepisosteus oculatus
ENSLOCG00000002718
I
0.766
ENSPPYG00000014030
Pongo abelii
ENSPPYG00000014030
I
0.766
ENSNLEG00000004651
Nomascus leucogenys
ENSNLEG00000004651
I
0.766
UBP1
Oryctolagus cuniculus
ENSOCUG00000011063
I
0.766
ENSP00000283629
Macaca fascicularis
ENSP00000283629
I
0.766
ENSCSAG00000009395
Chlorocebus sabaeus
ENSCSAG00000009395
I
0.766
UBP1
Pteropus vampyrus
ENSPVAG00000004158
I
0.766
UBP1
Macaca mulatta
ENSMMUG00000016917
I
0.766
UBP1
Cavia porcellus
ENSCPOG00000009270
I
0.766
UBP1
Callithrix jacchus
ENSCJAG00000012030
I
0.766
UBP1
Bos taurus
ENSBTAG00000003968
I
0.761
UBP1
Ochotona princeps
ENSOPRG00000012913
I
0.761
ENSPANG00000003702
Papio anubis
ENSPANG00000003702
I
0.761
UBP1
Otolemur garnettii
ENSOGAG00000000962
I
0.761
Ogr01415
Ophisaurus gracilis
Ogr01415
I
0.751
ENSFALG00000004962
Ficedula albicollis
ENSFALG00000004962
I
0.751
ENSAPLG00000001472
Anas platyrhynchos
ENSAPLG00000001472
I
0.746
Tal_R012945
Tyto alba
Tal_R012945
I
0.746
Gfo_R001955
Geospiza fortis
Gfo_R001955
I
0.746
ENSP00000263707
Macaca fascicularis
ENSP00000263707
I
0.746
Brh_R008147
Buceros rhinoceros
Brh_R008147
I
0.746
ENSGALG00000011980
Gallus gallus
ENSGALG00000011980
I
0.746
Aan_R001501
Calypte anna
Aan_R001501
I
0.746
ENSSTOG00000012083
Ictidomys tridecemlineatus
ENSSTOG00000012083
I
0.746
Afo_R010081
Aptenodytes forsteri
Afo_R010081
I
0.746
UBP1
Ornithorhynchus anatinus
ENSOANG00000008309
I
0.742
ENSPMAG00000006794
Petromyzon marinus
ENSPMAG00000006794
I
0.742
UBP1
Anolis carolinensis
ENSACAG00000013565
I
0.737
ENSMODG00000014457
Monodelphis domestica
ENSMODG00000014457
I
0.733
ENSONIG00000004467
Oreochromis niloticus
ENSONIG00000004467
I
0.732
ENSFALG00000004724
Ficedula albicollis
ENSFALG00000004724
I
0.732
ENSONIG00000002320
Oreochromis niloticus
ENSONIG00000002320
I
0.727
TFCP2
Oryctolagus cuniculus
ENSOCUG00000009026
I
0.727
ENSSHAG00000005805
Sarcophilus harrisii
ENSSHAG00000005805
I
0.722
ubp1
Gasterosteus aculeatus
ENSGACG00000005520
I
0.718
tfcp2l1
Danio rerio
ENSDARG00000029497
N
0.708
Alligator_sinensis_CCG020804.1
Alligator sinensis
Alligator_sinensis_CCG020804.1
N
0.708
TFCP2
Procavia capensis
ENSPCAG00000014181
I
0.707
ENSGMOG00000010354
Gadus morhua
ENSGMOG00000010354
I
0.703
ENSSHAG00000002647
Sarcophilus harrisii
ENSSHAG00000002647
I
0.703
ENSACAG00000017482
Anolis carolinensis
ENSACAG00000017482
I
0.703
ENSECAG00000023454
Equus caballus
ENSECAG00000023454
I
0.701