ubp1 (Danio rerio)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSDARG00000018000 T198951_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.794 0.794
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.775 0.775
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.775 0.775
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.775 0.775
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.766 0.766
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.766 0.766
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.766 0.766
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.737 0.737
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.737 0.737
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.737 0.737
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000100868 Grainyhead 43 257
ENSDARP00000126205 Grainyhead 43 257
ENSDARP00000137203 Grainyhead 43 257

Links

Other Grainyhead family TFs
Other Danio rerio TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.856
ubp1 Oryzias latipes ENSORLG00000011706 I 0.847
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.842
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.833
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.829
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.821
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.800
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.799
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.799
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.795
tfcp2 Danio rerio ENSDARG00000060306 I 0.794
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.794
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.794
UBP1 Equus caballus ENSECAG00000018555 I 0.794
UBP1 Felis catus ENSFCAG00000006123 I 0.794
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.794
UBP1 Sus scrofa ENSSSCG00000011235 I 0.794
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.794
UBP1 Echinops telfairi ENSETEG00000016510 I 0.793
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.793
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.791
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.789
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.789
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.789
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.789
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.789
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.789
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.789
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.788
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.787
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.785
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.785
TFCP2 Bos taurus ENSBTAG00000019312 I 0.785
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.785
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.785
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.785
TFCP2 Equus caballus ENSECAG00000020650 I 0.785
TFCP2 Felis catus ENSFCAG00000030292 I 0.785
TFCP2 Homo sapiens ENSG00000135457 D 0.785
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.785
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.785
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.785
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.785
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.785
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.785
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.785
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.785
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.785
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.785
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.785
UBP1 Sorex araneus ENSSARG00000008670 I 0.785
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.785
Aan_R009566 Calypte anna Aan_R009566 I 0.785
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.785
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.785
Tal_R010177 Tyto alba Tal_R010177 I 0.785
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.783
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.780
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.780
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.780
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.780
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.780
UBP1 Procavia capensis ENSPCAG00000008237 I 0.779
Aan_R003641 Calypte anna Aan_R003641 I 0.777
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.777
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.777
Tal_R011103 Tyto alba Tal_R011103 I 0.777
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.776
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.775
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.775
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.775
TFCP2L1 Homo sapiens ENSG00000115112 D 0.775
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.775
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.775
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.775
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.775
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.775
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.775
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.775
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.775
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.775
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.775
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.775
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.775
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.773
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.773
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.771
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.770
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.770
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.770
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.770
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.770
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.770
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.770
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.770
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.770
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.770
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.770
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.766
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.766
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.766
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.766
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.766
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.766
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.766
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.766
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.761
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.761
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.761
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.761
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.761
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.761
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.761
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.759
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.757
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.756
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.756
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.756
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.755
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.755
AAI06326 Xenopus laevis AAI06326 I 0.751
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.749
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.748
AAP78771 Xenopus laevis AAP78771 I 0.748
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.748
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.746
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.746
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.743
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.742
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.742
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.742
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.742
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.742
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.741
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.740
UBP1 Canis familiaris ENSCAFG00000004598 I 0.740
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.740
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.737
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.737
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.737
UBP1 Homo sapiens ENSG00000153560 D 0.737
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.737
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.737
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.737
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.737
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.737
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.737
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.737
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.737
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.737
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.737
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.737
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.736
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.736
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.733
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.732
UBP1 Bos taurus ENSBTAG00000003968 I 0.732
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.732
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.732
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.732
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.727
Ubp1 Mus musculus ENSMUSG00000009741 I 0.727
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.727
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.725
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.722
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.722
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.718
Aan_R001501 Calypte anna Aan_R001501 I 0.718
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.718
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.718
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.718
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.718
Tal_R012945 Tyto alba Tal_R012945 I 0.718
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.713
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.713
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.708
Pvit_07635 Pogona vitticeps Pvit_07635 I 0.708
Ogr16171 Ophisaurus gracilis Ogr16171 I 0.703