AAI06326 (Xenopus laevis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 AAI06326 T199586_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.867 0.867
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.829 0.829
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.829 0.829
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.829 0.829
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.829 0.829
TFCP2
M03074_2.00 		Homo sapiens
DAWCCGGTTY
RAACCGGWTH		 SELEX
Jolma et al.(2013)
TFCP2_1 		0.804 0.804
TFCP2
M03075_2.00 		Homo sapiens
WCCGGWWHDAWCYGGW
WCCRGWTHDWWCCGGW		 SELEX
Jolma et al.(2013)
TFCP2_2 		0.804 0.804
TFCP2
M04889_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_HT-SELEX 		0.804 0.804
TFCP2
M04891_2.00 		Homo sapiens
AWCYGGTTHNDACCGGTW
WACCGGTHNDAACCRGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_HT-SELEX 		0.804 0.804
TFCP2
M10610_2.00 		Homo sapiens
CTKGKTHKDGC
GCHMDAMCMAG		 Transfac
Matys et al.(2006)
V$CP2_01 		0.804 0.804
TFCP2
M10611_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_02 		0.804 0.804
TFCP2
M10612_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q4 		0.804 0.804
TFCP2
M10613_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CP2_Q6 		0.804 0.804
TFCP2
M04890_2.00 		Homo sapiens
DWCYRGWHNNDWCYRGWH
DWCYRGWHNNDWCYRGWH		 SELEX
Yin et al.(2017)
TFCP2_eDBD_Methyl-HT-SELEX 		0.804 0.804
TFCP2
M04892_2.00 		Homo sapiens
AWCCGGWTNDAWCCGGTT
AACCGGWTHNAACCGGWT		 SELEX
Yin et al.(2017)
TFCP2_FL_Methyl-HT-SELEX 		0.804 0.804
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.787 0.787
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.787 0.787
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.787 0.787
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.754 0.754
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.754 0.754
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.754 0.754
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI06326 Grainyhead 41 260

Links

Other Grainyhead family TFs
Other Xenopus laevis TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAP78771 Xenopus laevis AAP78771 I 1.000
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.981
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.976
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.952
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.948
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.947
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.943
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.942
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.932
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.924
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.924
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.924
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.924
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.924
TFCP2 Homo sapiens ENSG00000135457 D 0.923
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.915
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.901
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.900
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.880
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.879
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.871
ENSPMAG00000007229 Petromyzon marinus ENSPMAG00000007229 I 0.871
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.867
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.867
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.867
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.867
TFCP2 Equus caballus ENSECAG00000020650 I 0.867
TFCP2 Felis catus ENSFCAG00000030292 I 0.867
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.867
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.867
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.867
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.867
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.867
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.867
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.867
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.867
TFCP2 Bos taurus ENSBTAG00000019312 I 0.863
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.863
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.863
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.863
Aan_R009566 Calypte anna Aan_R009566 I 0.863
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.863
Tal_R010177 Tyto alba Tal_R010177 I 0.863
ENSLACG00000012609 Latimeria chalumnae ENSLACG00000012609 I 0.858
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.858
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.858
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.858
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.858
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.858
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.858
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.848
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.844
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.840
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.839
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.839
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.839
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.839
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.838
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.837
UBP1 Canis familiaris ENSCAFG00000004598 I 0.837
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.837
Ubp1 Mus musculus ENSMUSG00000009741 I 0.837
tfcp2 Danio rerio ENSDARG00000060306 I 0.834
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.832
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.832
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.829
UBP1 Homo sapiens ENSG00000153560 D 0.829
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.829
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.829
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.827
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.825
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.825
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.825
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.825
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.825
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.825
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.825
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.825
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.825
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.825
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.825
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.823
UBP1 Bos taurus ENSBTAG00000003968 I 0.820
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.820
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.820
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.820
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.817
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.815
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.813
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.810
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.810
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.810
Aan_R001501 Calypte anna Aan_R001501 I 0.810
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.810
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.810
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.810
Tal_R012945 Tyto alba Tal_R012945 I 0.810
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.807
tfcp2l1.S Xenopus laevis XB-GENE-6255174 I 0.807
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.806
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.806
Aan_R003641 Calypte anna Aan_R003641 I 0.806
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.806
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.806
Tal_R011103 Tyto alba Tal_R011103 I 0.806
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.804
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.802
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.801
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.799
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.798
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.798
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.796
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.796
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.796
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.794
TFCP2L1 Homo sapiens ENSG00000115112 D 0.794
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.794
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.794
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.794
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.794
UBP1 Procavia capensis ENSPCAG00000008237 I 0.793
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.791
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.791
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.788
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.787
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.787
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.787
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.787
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.787
UBP1 Sus scrofa ENSSSCG00000011235 I 0.787
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.787
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.787
UBP1 Equus caballus ENSECAG00000018555 I 0.782
UBP1 Felis catus ENSFCAG00000006123 I 0.782
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.782
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.782
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.782
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.782
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.782
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.782
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.782
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.780
UBP1 Echinops telfairi ENSETEG00000016510 I 0.779
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.777
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.777
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.777
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.777
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.777
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.777
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.777
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.777
UBP1 Sorex araneus ENSSARG00000008670 I 0.777
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.777
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.777
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.776
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.773
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.773
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.773
ubp1 Oryzias latipes ENSORLG00000011706 I 0.773
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.773
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.773
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.768
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.768
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.768
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.768
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.768
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.763
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.763
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.762
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.761
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.757
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.754
ubp1 Danio rerio ENSDARG00000018000 I 0.751
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.749
UBP1 Taeniopygia guttata ENSTGUG00000001752 I 0.744
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.739
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.739
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.736
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.735
TFCP2 Procavia capensis ENSPCAG00000014181 I 0.728
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.720
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.720
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.720
ENSMODG00000014457 Monodelphis domestica ENSMODG00000014457 I 0.718
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.716
Ogr16171 Ophisaurus gracilis Ogr16171 I 0.716
ENSECAG00000023454 Equus caballus ENSECAG00000023454 I 0.706
Pvit_07635 Pogona vitticeps Pvit_07635 I 0.706