Pvit_14440 (Pogona vitticeps)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 Pvit_14440 T199561_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.770 0.770
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.770 0.770
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.770 0.770
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.770 0.770
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.770 0.770
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_14440 Grainyhead 218 434

Links

Other Grainyhead family TFs
Other Pogona vitticeps TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R015393 Calypte anna Aan_R015393 I 0.737
Afo_R015753 Aptenodytes forsteri Afo_R015753 I 0.820
Brh_R003016 Buceros rhinoceros Brh_R003016 I 0.737
GRHL1 Anolis carolinensis ENSACAG00000000132 I 0.833
ENSAMEG00000011320 Ailuropoda melanoleuca ENSAMEG00000011320 I 0.793
ENSAPLG00000008667 Anas platyrhynchos ENSAPLG00000008667 I 0.820
GRHL1 Bos taurus ENSBTAG00000007485 I 0.770
GRHL1 Canis familiaris ENSCAFG00000003394 I 0.789
GRHL1 Callithrix jacchus ENSCJAG00000006431 I 0.770
GRHL1 Cavia porcellus ENSCPOG00000010783 I 0.774
ENSCSAG00000007158 Chlorocebus sabaeus ENSCSAG00000007158 I 0.783
GRHL1 Dasypus novemcinctus ENSDNOG00000014493 I 0.783
GRHL1 Equus caballus ENSECAG00000015969 I 0.798
ENSFALG00000006639 Ficedula albicollis ENSFALG00000006639 I 0.820
GRHL1 Felis catus ENSFCAG00000007856 I 0.760
GRHL1 Homo sapiens ENSG00000134317 D 0.779
ENSGALG00000016439 Gallus gallus ENSGALG00000016439 I 0.820
GRHL1 Gorilla gorilla ENSGGOG00000002692 I 0.783
GRHL1 Loxodonta africana ENSLAFG00000009330 I 0.770
GRHL1 Meleagris gallopavo ENSMGAG00000014007 I 0.820
GRHL1 Myotis lucifugus ENSMLUG00000002290 I 0.783
GRHL1 Macaca mulatta ENSMMUG00000001535 I 0.783
ENSMMUP00000002046 Macaca fascicularis ENSMMUP00000002046 I 0.783
GRHL1 Monodelphis domestica ENSMODG00000014753 I 0.783
ENSMPUG00000013263 Mustela putorius furo ENSMPUG00000013263 I 0.783
Grhl1 Mus musculus ENSMUSG00000020656 I 0.765
ENSNLEG00000013634 Nomascus leucogenys ENSNLEG00000013634 I 0.783
GRHL1 Ornithorhynchus anatinus ENSOANG00000007788 I 0.779
ENSOARG00000015298 Ovis aries ENSOARG00000015298 I 0.793
GRHL1 Oryctolagus cuniculus ENSOCUG00000017717 I 0.760
GRHL1 Otolemur garnettii ENSOGAG00000014342 I 0.770
ENSP00000384209-D1 Bos grunniens ENSP00000384209-D1 I 0.770
ENSPANG00000020814 Papio anubis ENSPANG00000020814 I 0.774
ENSPPYG00000012661 Pongo abelii ENSPPYG00000012661 I 0.774
ENSPSIG00000010930 Pelodiscus sinensis ENSPSIG00000010930 I 0.724
GRHL1 Pan troglodytes ENSPTRG00000011643 I 0.789
GRHL1 Pteropus vampyrus ENSPVAG00000002002 I 0.770
Grhl1 Rattus norvegicus ENSRNOG00000054989 I 0.760
ENSSHAG00000002291 Sarcophilus harrisii ENSSHAG00000002291 I 0.783
GRHL1 Taeniopygia guttata ENSTGUG00000013038 I 0.816
GRHL1 Vicugna pacos ENSVPAG00000010842 I 0.760
Gfo_R015266 Geospiza fortis Gfo_R015266 I 0.820
Myotis_brandtii_GRHL1_10020834 Myotis brandtii Myotis_brandtii_GRHL1_10020834 I 0.770
Ogr04284 Ophisaurus gracilis Ogr04284 I 0.853
Tal_R012680 Tyto alba Tal_R012680 I 0.820
grhl1.L Xenopus laevis XB-GENE-486580 I 0.797
XP_002938935 Xenopus tropicalis XP_002938935 I 0.802
XP_002938936 Xenopus tropicalis XP_002938936 I 0.774