CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00016p00207780
(
Amborella trichopoda
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AMTR_s00016p00207780
T199777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN06264
GRAS
1
220
MTGLGSQLELVRETGRRLADLAHSLRVPFEFHAVADPLEELRPRALGRRIGEALAINAVNRLHHVAPHALGPLLALFRDQAPKIVTLVEQEASHNSPYFLSRFLEALHYYSATFDSLDATFPTDSPQRARVEKFIFAAEINNIVACEGAARVERHERLERWRRVMEGKGFRGVPLSANAVNQSRMLLSIYTCDGYRLNEDAGCLLLGWQDRPLIAVSAWR
Links
Other
GRAS
family TFs
Other
Amborella trichopoda
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Contig262.1.g32
Oxytricha trifallax
Contig262.1.g32
I
0.000
Eucgr.J01752
Eucalyptus grandis
Eucgr.J01752
I
0.000
JAAARDRAFT_628099
Jaapia argillacea
JAAARDRAFT_628099
I
0.000
PGTG_01493
Puccinia graminis
PGTG_01493
I
0.000