CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00016p00207780
(
Amborella trichopoda
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AMTR_s00016p00207780
T199777_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN06264
GRAS
1
220
MTGLGSQLELVRETGRRLADLAHSLRVPFEFHAVADPLEELRPRALGRRIGEALAINAVNRLHHVAPHALGPLLALFRDQAPKIVTLVEQEASHNSPYFLSRFLEALHYYSATFDSLDATFPTDSPQRARVEKFIFAAEINNIVACEGAARVERHERLERWRRVMEGKGFRGVPLSANAVNQSRMLLSIYTCDGYRLNEDAGCLLLGWQDRPLIAVSAWR
Links
Other
GRAS
family TFs
Other
Amborella trichopoda
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK23183.1
Cannabis sativa
PK23183.1
N
0.733
Lus10041540.g
Linum usitatissimum
Lus10041540.g
N
0.723
BRADI4G18390
Brachypodium distachyon
BRADI4G18390
N
0.714
Cla012038
Citrullus lanatus
Cla012038
N
0.709
Si027708m.g
Setaria italica
Si027708m.g
N
0.705
Traes_2BS_D32231DB0
Triticum aestivum
Traes_2BS_D32231DB0
N
0.705
TCM_017269
Theobroma cacao
TCM_017269
N
0.700