CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra028390
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra028390
T200001_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra028390.1-P
GRAS
331
702
LRTLLVSCAQAVSSNDRKMAEDLLRQVRQHSSSHGDGTERLAHYLADSLEARLAGTGTQIYTALSSKKTSASDMLKAYQTYISVCPFKKTAIIFANHSIMHLAPTDAKTIHIIDFGISYGFQWPPLIHRLAWRRGGSCKLRITGIELPQRGFRPAEGVNETGERLARYCQRYNVPFEYNGIAQKWETIKLEDLKLREGEFVAVNSLFRFRNLLDETVAVHSPRDAVLKLIKKIKPNVFIPAVLSGSYNAPFFVTRFREVLFHYSSLFDMCDTSLPRGDPMRVMFEKEFYGREIMNVVACEGSERVERPESYKQWQARAMRAGFRQLTLEKELVQKLKLMVESGYRSKEFDVDQDGNWLLQGWKGRIVYASCT
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0003s01170
Populus trichocarpa
POPTR_0003s01170
N
POPTR_0003s01200
Populus trichocarpa
POPTR_0003s01200
N
POPTR_0003s01220
Populus trichocarpa
POPTR_0003s01220
N
POPTR_0003s01240
Populus trichocarpa
POPTR_0003s01240
N
POPTR_0074s00200
Populus trichocarpa
POPTR_0074s00200
N
SapurV1A.0310s0190
Salix purpurea
SapurV1A.0310s0190
N
SapurV1A.0310s0210
Salix purpurea
SapurV1A.0310s0210
N
SapurV1A.0310s0230
Salix purpurea
SapurV1A.0310s0230
N
SapurV1A.0647s0100
Salix purpurea
SapurV1A.0647s0100
N
SapurV1A.0893s0110
Salix purpurea
SapurV1A.0893s0110
N
SapurV1A.3003s0030
Salix purpurea
SapurV1A.3003s0030
N
SapurV1A.3015s0020
Salix purpurea
SapurV1A.3015s0020
N
SapurV1A.3015s0030
Salix purpurea
SapurV1A.3015s0030
N