CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
POPTR_0003s01240
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0003s01240
T020828_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s01240.1
B3
4
103
FSEVLGDTDVRFRFSLPAHCLQHLDFAGNNYVDLHVKDSSGELRVIRCLKRNEDYDKPVLSKGWLKFVADYGLRADDMVVLHREDDHNLGSQFRIEAKRR
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0074s00200
Populus trichocarpa
POPTR_0074s00200
N
0.835
SapurV1A.0893s0110
Salix purpurea
SapurV1A.0893s0110
N
0.804
POPTR_0003s01170
Populus trichocarpa
POPTR_0003s01170
N
0.794
POPTR_0003s01200
Populus trichocarpa
POPTR_0003s01200
N
0.784
POPTR_0003s01220
Populus trichocarpa
POPTR_0003s01220
N
0.784
SapurV1A.3015s0020
Salix purpurea
SapurV1A.3015s0020
N
0.784
POPTR_0003s01190
Populus trichocarpa
POPTR_0003s01190
N
0.763
SapurV1A.0647s0100
Salix purpurea
SapurV1A.0647s0100
N
0.763
SapurV1A.0310s0230
Salix purpurea
SapurV1A.0310s0230
N
0.758
SapurV1A.0310s0190
Salix purpurea
SapurV1A.0310s0190
N
0.701
SapurV1A.0310s0210
Salix purpurea
SapurV1A.0310s0210
N
0.701
SapurV1A.3003s0030
Salix purpurea
SapurV1A.3003s0030
N
0.701