CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G06655
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA12G06655
T200209_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G06655.1
GRAS
299
674
LRNLLLMCSQAVYASDIRAANELLKQIRQHSSPIGDASQRLAHYFANGLEARLVGDGTSTQGMYTFLSSKNNTFSELLKAYQVFSSSSPFKKFAYLFENTMIMKAAASAETVHIIDFGILHGFQWPMLIRLLSNREGGPPKLRITGIEFPQPGFRPTEKIEETGRHLANYCKRYNVPFEYNAISSRNWETIQLEALKIASNELVAVYCHQRFENLLDECTIEVNSPRNAVLHLIRKINPDIFTHSITNGSYNAPFFTTRFREALFHYSAISDKNDTVISRENERRLMVERELYGREIMNVIACEGSDRIERPETYKRWQVRNMKAGFKQLPLNEELMAKFRSKLKEYHRDFVLDENNNWMLQGWKGRILFASSCWV
GLYMA12G06655.2
GRAS
299
674
LRNLLLMCSQAVYASDIRAANELLKQIRQHSSPIGDASQRLAHYFANGLEARLVGDGTSTQGMYTFLSSKNNTFSELLKAYQVFSSSSPFKKFAYLFENTMIMKAAASAETVHIIDFGILHGFQWPMLIRLLSNREGGPPKLRITGIEFPQPGFRPTEKIEETGRHLANYCKRYNVPFEYNAISSRNWETIQLEALKIASNELVAVYCHQRFENLLDECTIEVNSPRNAVLHLIRKINPDIFTHSITNGSYNAPFFTTRFREALFHYSAISDKNDTVISRENERRLMVERELYGREIMNVIACEGSDRIERPETYKRWQVRNMKAGFKQLPLNEELMAKFRSKLKEYHRDFVLDENNNWMLQGWKGRILFASSCWV
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29950.m001173
Ricinus communis
29950.m001173
I
0.000
30078.m002348
Ricinus communis
30078.m002348
I
0.000
NAC018
Arabidopsis thaliana
AT1G52880
D
0.000
NAC047
Arabidopsis thaliana
AT3G04070
D
0.000
Bo1g128420
Brassica oleracea
Bo1g128420
I
0.000
Bo1g152220
Brassica oleracea
Bo1g152220
I
0.000
Bo5g148420
Brassica oleracea
Bo5g148420
I
0.000
Bostr.0124s0081
Boechera stricta
Bostr.0124s0081
I
0.000
Bostr.2570s0301
Boechera stricta
Bostr.2570s0301
I
0.000
Bra021114
Brassica rapa
Bra021114
I
0.000
Bra031949
Brassica rapa
Bra031949
I
0.000
Bra040152
Brassica rapa
Bra040152
I
0.000
Cagra.0946s0024
Capsella grandiflora
Cagra.0946s0024
I
0.000
Cagra.2026s0001
Capsella grandiflora
Cagra.2026s0001
I
0.000
Carubv10009524m.g
Capsella rubella
Carubv10009524m.g
I
0.000
Carubv10014000m.g
Capsella rubella
Carubv10014000m.g
I
0.000
cassava22631.valid.m1
Manihot esculenta
cassava22631.valid.m1
I
0.000
cassava35701.valid.m1
Manihot esculenta
cassava35701.valid.m1
I
0.000
Ciclev10020717m.g
Citrus clementina
Ciclev10020717m.g
I
0.000
Eucgr.A02070
Eucalyptus grandis
Eucgr.A02070
I
0.000
Eucgr.K01471
Eucalyptus grandis
Eucgr.K01471
N
0.000
F775_02308
Aegilops tauschii
F775_02308
I
0.000
anac047
Arabidopsis lyrata
fgenesh2_kg.3__367__AT3G04070.1
I
0.000
GLYMA16G26740
Glycine max
GLYMA16G26740
I
0.000
Gorai.007G267900
Gossypium raimondii
Gorai.007G267900
I
0.000
Gorai.013G191800
Gossypium raimondii
Gorai.013G191800
I
0.000
GRMZM2G011598
Zea mays
GRMZM2G011598
I
0.000
LPERR03G13950
Leersia perrieri
LPERR03G13950
I
0.000
Lus10003269.g
Linum usitatissimum
Lus10003269.g
I
0.000
Lus10006547.g
Linum usitatissimum
Lus10006547.g
I
0.000
Lus10042531.g
Linum usitatissimum
Lus10042531.g
I
0.000
MDP0000180683
Malus domestica
MDP0000180683
I
0.000
MDP0000404409
Malus domestica
MDP0000404409
I
0.000
MDP0000674514
Malus domestica
MDP0000674514
I
0.000
MLOC_65101
Hordeum vulgare
MLOC_65101
I
0.000
OB03G25680
Oryza brachyantha
OB03G25680
I
0.000
OPUNC07G25060
Oryza punctata
OPUNC07G25060
I
0.000
orange1.1g017665m.g
Citrus sinensis
orange1.1g017665m.g
I
0.000
Pm025312
Prunus mume
Pm025312
I
0.000
POPTR_0013s05080
Populus trichocarpa
POPTR_0013s05080
I
0.000
POPTR_0019s04690
Populus trichocarpa
POPTR_0019s04690
I
0.000
PRUPE_ppa007445mg
Prunus persica
PRUPE_ppa007445mg
I
0.000
SapurV1A.0867s0160
Salix purpurea
SapurV1A.0867s0160
I
0.000
SapurV1A.1058s0080
Salix purpurea
SapurV1A.1058s0080
I
0.000
SapurV1A.1196s0040
Salix purpurea
SapurV1A.1196s0040
I
0.000
SapurV1A.2115s0010
Salix purpurea
SapurV1A.2115s0010
I
0.000
TCM_026030
Theobroma cacao
TCM_026030
I
0.000
Thhalv10021011m.g
Eutrema salsugineum
Thhalv10021011m.g
I
0.000
Traes_4AS_DBDA5E9C6
Triticum aestivum
Traes_4AS_DBDA5E9C6
I
0.000
Traes_4DL_F0BE36C9D
Triticum aestivum
Traes_4DL_F0BE36C9D
I
0.000
TRIUR3_29857
Triticum urartu
TRIUR3_29857
I
0.000
anac047
Vitis vinifera
VIT_08s0007g07670
I
0.000