Lus10042531.g (Linum usitatissimum)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02365 (NAM) IPR003441 Lus10042531.g T298374_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NAC047
M07198_2.00 		Arabidopsis thaliana
CACGB
VCGTG		 Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a 		0.917 0.830
NAC047
M07199_2.00 		Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW		 Dap-seq
OMalley et al.(2016)
ANAC047_col 		0.917 0.830
NAC018
M07176_2.00 		Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH		 Dap-seq
OMalley et al.(2016)
NAM_colamp_a 		0.871 0.741
NAC018
M07177_2.00 		Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW		 Dap-seq
OMalley et al.(2016)
NAM_col_v3a 		0.871 0.741
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10042531 NAC/NAM 13 145

Links

Other NAC/NAM family TFs
Other Linum usitatissimum TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava35701.valid.m1 Manihot esculenta cassava35701.valid.m1 I 0.946
TCM_026030 Theobroma cacao TCM_026030 I 0.944
Gorai.013G191800 Gossypium raimondii Gorai.013G191800 I 0.944
POPTR_0013s05080 Populus trichocarpa POPTR_0013s05080 I 0.942
Lus10006547.g Linum usitatissimum Lus10006547.g I 0.941
cassava22631.valid.m1 Manihot esculenta cassava22631.valid.m1 I 0.938
Ciclev10020717m.g Citrus clementina Ciclev10020717m.g I 0.936
Lus10003269.g Linum usitatissimum Lus10003269.g I 0.936
orange1.1g017665m.g Citrus sinensis orange1.1g017665m.g I 0.936
SapurV1A.1058s0080 Salix purpurea SapurV1A.1058s0080 I 0.936
SapurV1A.2115s0010 Salix purpurea SapurV1A.2115s0010 I 0.936
29950.m001173 Ricinus communis 29950.m001173 I 0.933
SapurV1A.0867s0160 Salix purpurea SapurV1A.0867s0160 I 0.933
SapurV1A.1196s0040 Salix purpurea SapurV1A.1196s0040 I 0.933
POPTR_0019s04690 Populus trichocarpa POPTR_0019s04690 I 0.930
anac047 Vitis vinifera VIT_08s0007g07670 I 0.919
anac047 Arabidopsis lyrata fgenesh2_kg.3__367__AT3G04070.1 I 0.918
Bostr.2570s0301 Boechera stricta Bostr.2570s0301 I 0.918
Cagra.2026s0001 Capsella grandiflora Cagra.2026s0001 I 0.918
Carubv10014000m.g Capsella rubella Carubv10014000m.g I 0.918
NAC047 Arabidopsis thaliana AT3G04070 D 0.917
Gorai.007G267900 Gossypium raimondii Gorai.007G267900 I 0.917
Thhalv10021011m.g Eutrema salsugineum Thhalv10021011m.g I 0.911
Bo1g152220 Brassica oleracea Bo1g152220 I 0.907
Bra040152 Brassica rapa Bra040152 I 0.907
MDP0000674514 Malus domestica MDP0000674514 I 0.906
Eucgr.K01471 Eucalyptus grandis Eucgr.K01471 N 0.905
GLYMA19G28476 Glycine max GLYMA19G28476 I 0.900
Lus10011215.g Linum usitatissimum Lus10011215.g I 0.899
Lus10018469.g Linum usitatissimum Lus10018469.g I 0.899
Bra031949 Brassica rapa Bra031949 I 0.898
GLYMA16G04740 Glycine max GLYMA16G04740 I 0.898
GLYMA07G31220 Glycine max GLYMA07G31220 I 0.891
Bo5g148420 Brassica oleracea Bo5g148420 I 0.890
anac025 Vitis vinifera VIT_00s0375g00040 I 0.888
Bo1g128420 Brassica oleracea Bo1g128420 I 0.883
Bra021114 Brassica rapa Bra021114 I 0.883
F775_02308 Aegilops tauschii F775_02308 I 0.882
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.882
OBART03G15960 Oryza barthii OBART03G15960 I 0.882
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.882
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.882
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.882
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.882
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.882
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.882
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.882
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.882
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.882
Cagra.0946s0024 Capsella grandiflora Cagra.0946s0024 I 0.880
Carubv10009524m.g Capsella rubella Carubv10009524m.g I 0.880
30078.m002348 Ricinus communis 30078.m002348 I 0.878
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.877
OS03G0327800 Oryza sativa OS03G0327800 I 0.877
Gorai.012G169300 Gossypium raimondii Gorai.012G169300 N 0.876
PK08629.1 Cannabis sativa PK08629.1 I 0.874
NAC018 Arabidopsis thaliana AT1G52880 D 0.871
Bostr.0124s0081 Boechera stricta Bostr.0124s0081 I 0.871