CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400006132
(
Solanum tuberosum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PGSC0003DMG400006132
T201111_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400015695
GRAS
165
535
LKQVLIACAKAVSDGELVTAQVLISELRQMVSVSGEPIQRLGAYILEGLVARLGASGSSICKSLRCKEPASFELLSYMHVLYEICPYFKFGYMSANGAIAEAMKDENRVHIIDFQIAQGSQWVPMIQAFAARPGGPPHIRITGIDDSTSAYARGGGLDIVGQRLSKLAKTFKVPFEFHPAAMSGSDVQLKNLGIQPGEALAVNFAFTLHHMPDESVSTENHRDRLLRMVKNLNPKVVTLVEQESNTNTAAFFPRFLETLDYYSAMFESIDMTLSRGHKERINVEQHCLARDVVNIIACEGIERVERHELLGKWKSRFRMAGFNPYPLSSLVNATIKTLLESYSDKYRLEERDGALYLGWMNRDLVASCAWK
PGSC0003DMT400015696
GRAS
165
535
LKQVLIACAKAVSDGELVTAQVLISELRQMVSVSGEPIQRLGAYILEGLVARLGASGSSICKSLRCKEPASFELLSYMHVLYEICPYFKFGYMSANGAIAEAMKDENRVHIIDFQIAQGSQWVPMIQAFAARPGGPPHIRITGIDDSTSAYARGGGLDIVGQRLSKLAKTFKVPFEFHPAAMSGSDVQLKNLGIQPGEALAVNFAFTLHHMPDESVSTENHRDRLLRMVKNLNPKVVTLVEQESNTNTAAFFPRFLETLDYYSAMFESIDMTLSRGHKERINVEQHCLARDVVNIIACEGIERVERHELLGKWKSRFRMAGFNPYPLSSLVNATIKTLLESYSDKYRLEERDGALYLGWMNRDLVASCAWK
Links
Other
GRAS
family TFs
Other
Solanum tuberosum
TFs
106 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KAFR_0E00800
Kazachstania africana
KAFR_0E00800
I
0.000
KLLA0_E24025g
Kluyveromyces lactis
KLLA0_E24025g
I
0.000
KLTH0E13156g
Lachancea thermotolerans
KLTH0E13156g
I
0.000
KLTH0E13156g
Kluyveromyces thermotolerans
KLTH0E13156g
I
0.000
KNAG_0A01830
Kazachstania naganishii
KNAG_0A01830
I
0.000
NCAS_0C01980
Naumovozyma castellii
NCAS_0C01980
I
0.000
NDAI_0E02700
Naumovozyma dairenensis
NDAI_0E02700
I
0.000
SAKL0H09416g
Lachancea kluyveri
SAKL0H09416g
I
0.000
Scas_Contig664.4
Saccharomyces castellii
Scas_Contig664.4
I
0.000
TBLA_0B04500
Tetrapisispora blattae
TBLA_0B04500
N
0.000
TDEL_0A05090
Torulaspora delbrueckii
TDEL_0A05090
I
0.000