CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0004s07700
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0004s07700
T201187_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0004s07700.1
GRAS
263
640
SKQTVIEAASAIYEGKTDVYTEILTRVSLVSSPGGNSEQRLIEYMLMALKSRLNSSENTTSVMELYSKEHVDATQLLYDLSPCFKLGFMAANLAIIDATREQEQEANTSSNGFHVVDFDIGHGGQYKNLLHALSGLQNSKPAIVKITAVAADSNGVEEERLRLVGETLTQLARRVGLNLCFNVVSCKLSELTRESLGCEPDEALAVNFAFKLYRMPDESVSSTENPRDELLRRVKGLAPRVVTVVEQEMNTNTAPFMARVNESCSYYGALFDSIESTVKGDNSERAKVEEGLGRRMVNSVACEGRDRVERCEVFGKWRARMGMAGFELKPLSHNIAESMKTRLSLANRVNPGFSVKEENGGVCFGWMGKTLTVASAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AARA002562
Anopheles arabiensis
AARA002562
N
AATE017083
Anopheles atroparvus
AATE017083
N
ACUA018382
Anopheles culicifacies
ACUA018382
N
ADIR000927
Anopheles dirus
ADIR000927
N
AEPI000454
Anopheles epiroticus
AEPI000454
N
AFAF016022
Anopheles farauti
AFAF016022
N
AFUN011482
Anopheles funestus
AFUN011482
N
AGAP000876
Anopheles gambiae
AGAP000876
N
AMAM014999
Anopheles maculatus
AMAM014999
N
AMEC019303
Anopheles melas
AMEC019303
N
AMEM003072
Anopheles merus
AMEM003072
N
AMIN005829
Anopheles minimus
AMIN005829
N
AQUA002447
Anopheles quadriannulatus
AQUA002447
N
ASTEI01188
Anopheles stephensi
ASTEI01188
N
BGIBMGA001001
Bombyx mori
BGIBMGA001001
N
CPIJ008120
Culex quinquefasciatus
CPIJ008120
N
CPIJ018670
Culex quinquefasciatus
CPIJ018670
N
CpipJ_CPIJ008120
Culex pipiens
CpipJ_CPIJ008120
N
CpipJ_CPIJ018670
Culex pipiens
CpipJ_CPIJ018670
N
HMEL006591
Heliconius melpomene
HMEL006591
N
KGM_17269
Danaus plexippus
KGM_17269
N