CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0016s15060
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0016s15060
T201247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0016s15060.1
GRAS
412
770
LLTLLLQCAEAVSADNFEEANKMLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYATLPSMPQSHTQKMASAFQVFNGIGPFVKFSHFTANQAIQEAFEREERVHIIDLDVMQGLQWPGLFHILASRPGGPPYVRLTGLGTSLEALEATGKRLSDFAHKLGLPFEFIPVAEKVGNLEPERLNVSKREAVAVHWLQHSLYDVTGSDTNMLCLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSREIRNVLAVGGPSRSGDVKFHNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGTLKLGWKDLCLLTASAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
72 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL006419
Aedes aegypti
AAEL006419
I
AALB007981
Anopheles albimanus
AALB007981
I
AARA009493
Anopheles arabiensis
AARA009493
I
AATE009298
Anopheles atroparvus
AATE009298
I
ACEP17167
Atta cephalotes
ACEP17167
I
ACOM040639
Anopheles coluzzii
ACOM040639
I
ACUA014515
Anopheles culicifacies
ACUA014515
I
ACYPI001225
Acyrthosiphon pisum
ACYPI001225
I
ACYPI009607
Acyrthosiphon pisum
ACYPI009607
I
ADAC001896
Anopheles darlingi
ADAC001896
I
ADIR011431
Anopheles dirus
ADIR011431
I
AEPI005106
Anopheles epiroticus
AEPI005106
I
AFAF012186
Anopheles farauti
AFAF012186
I
AFUN007280
Anopheles funestus
AFUN007280
I
AGAP008935
Anopheles gambiae
AGAP008935
I
AMAM009373
Anopheles maculatus
AMAM009373
I
AMEC017285
Anopheles melas
AMEC017285
I
AMEM004324
Anopheles merus
AMEM004324
I
AMIN005880
Anopheles minimus
AMIN005880
I
AQUA011533
Anopheles quadriannulatus
AQUA011533
I
ASIS021327
Anopheles sinensis
ASIS021327
I
ASTEI01929
Anopheles stephensi
ASTEI01929
I
BGIBMGA003113
Bombyx mori
BGIBMGA003113
I
Cflo_01916--XP_397309.1_APIME
Camponotus floridanus
Cflo_01916--XP_397309.1_APIME
I
CLEC005205
Cimex lectularius
CLEC005205
I
CPIJ004183
Culex quinquefasciatus
CPIJ004183
I
CpipJ_CPIJ004183
Culex pipiens
CpipJ_CPIJ004183
I
DAPPUDRAFT_98470
Daphnia pulex
DAPPUDRAFT_98470
I
rbpja
Danio rerio
ENSDARG00000003398
I
rbpjb
Danio rerio
ENSDARG00000052091
I
ENSGMOG00000006156
Gadus morhua
ENSGMOG00000006156
I
RBPJ
Meleagris gallopavo
ENSMGAG00000012418
I
Su(H)
Drosophila melanogaster
FBgn0004837
D
Su(H)
Drosophila simulans
FBgn0027417
I
GF14905
Drosophila ananassae
FBgn0091930
I
GG25142
Drosophila erecta
FBgn0117267
I
GH10915
Drosophila grimshawi
FBgn0118396
I
GI13259
Drosophila mojavensis
FBgn0136016
I
GL26026
Drosophila persimilis
FBgn0163608
I
GM15894
Drosophila sechellia
FBgn0170810
I
GJ11880
Drosophila virilis
FBgn0199134
I
GE20814
Drosophila yakuba
FBgn0238107
I
GA25242
Drosophila pseudoobscura
FBgn0246623
I
GA25243
Drosophila pseudoobscura
FBgn0246624
I
GB45655
Apis mellifera
GB45655
I
HelroG186992
Helobdella robusta
HelroG186992
I
HHAL001644-PA
Halyomorpha halys
HHAL001644-PA
I
HMEL017244
Heliconius melpomene
HMEL017244
I
Hsal_09918--XP_397309.1_APIME
Harpegnathos saltator
Hsal_09918--XP_397309.1_APIME
I
ISCW010197
Ixodes scapularis
ISCW010197
I
KGM_08407
Danaus plexippus
KGM_08407
I
L798_15068
Zootermopsis nevadensis
L798_15068
I
LCUP003485
Lucilia cuprina
LCUP003485
I
LDEC018359
Leptinotarsa decemlineata
LDEC018359
I
LLOJ000758
Lutzomyia longipalpis
LLOJ000758
I
LLOJ000759
Lutzomyia longipalpis
LLOJ000759
I
LotgiG159505
Lottia gigantea
LotgiG159505
I
MDOA002342
Musca domestica
MDOA002342
I
MESCA005881
Megaselia scalaris
MESCA005881
I
NV17858
Nasonia vitripennis
NV17858
I
NV17967
Nasonia vitripennis
NV17967
I
PHUM462870
Pediculus humanus
PHUM462870
I
Sakowv30027441m.g
Saccoglossus kowalevskii
Sakowv30027441m.g
I
SINV15808
Solenopsis invicta
SINV15808
I
SMAR001432
Strigamia maritima
SMAR001432
I
TC014468
Tribolium castaneum
TC014468
I
tetur04g02700
Tetranychus urticae
tetur04g02700
I
tetur04g02730
Tetranychus urticae
tetur04g02730
I
tetur11g00180
Tetranychus urticae
tetur11g00180
I
tetur11g06371
Tetranychus urticae
tetur11g06371
I
YQE_03219
Dendroctonus ponderosae
YQE_03219
I