HelroG186992 (Helobdella robusta)
CSL

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF09271 (LAG1-DNAbind) IPR015351 HelroG186992 T166173_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Su(H)
M10415_2.00 		Drosophila melanogaster
VGKTTCYCACRVY
RBYGTGRGAAMCB		 Transfac
Matys et al.(2006)
I$SUH_01 		0.752 0.752
Su(H)
M08455_2.00 		Drosophila melanogaster
HBHNVGKTTCYCACRV
BYGTGRGAAMCBNDVD		 COMPILED
Mathelier et al.(2014)
MA0085.1 		0.752 0.752
RBPJ
M00735_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig2 		0.728 0.728
RBPJ
M00736_2.00 		Homo sapiens
NNNYTCHCAN
NTGDGARNNN		 PBM
DelBianco et al.(2010)
GST-CSL_Fig4 		0.728 0.728
RBPJ
M00737_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
GST-CSL-NOTCH1 		0.728 0.728
RBPJ
M00738_2.00 		Homo sapiens
NBTCHCAN
NTGDGAVN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His_MAML1 		0.728 0.728
RBPJ
M00739_2.00 		Homo sapiens
NNBTCHCAN
NTGDGAVNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_CSL-6His 		0.728 0.728
RBPJ
M00740_2.00 		Homo sapiens
NNNYTCYCAN
NTGRGARNNN		 PBM
DelBianco et al.(2010)
GST-NOTCH1_Fig2 		0.728 0.728
RBPJ
M00741_2.00 		Homo sapiens
NNNBTCHCAN
NTGDGAVNNN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig2 		0.728 0.728
RBPJ
M00742_2.00 		Homo sapiens
NDYTCHCAB
VTGDGARHN		 PBM
DelBianco et al.(2010)
MAML1-CSL-GST-NOTCH1_Fig5 		0.728 0.728
RBPJ
M08105_2.00 		Homo sapiens
NNTTCCCABN
NVTGGGAANN		 ChIP-seq
Mathelier et al.(2014)
MA1116.1 		0.728 0.728
RBPJ
M09020_2.00 		Homo sapiens
BTTCCCASVVN
NBBSTGGGAAV		 Misc
Kulakovskiy et al.(2013)
SUH_HUMAN.H11MO.0.A 		0.728 0.728
Rbpj
M09021_2.00 		Mus musculus
NBTTCCCASVV
BBSTGGGAAVN		 Misc
Kulakovskiy et al.(2013)
SUH_MOUSE.H11MO.0.A 		0.728 0.728
RBPJ
M10413_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_01 		0.728 0.728
RBPJ
M10414_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RBPJK_Q4 		0.728 0.728
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP186992 CSL 13 137

Links

Other CSL family TFs
Other Helobdella robusta TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sjc_0108400 Schistosoma japonicum Sjc_0108400 I 0.889
D915_08967 Fasciola hepatica D915_08967 I 0.889
SCUD_0000326701 Schistosoma curassoni SCUD_0000326701 I 0.889
SMRZ_0000802101 Schistosoma margrebowiei SMRZ_0000802101 I 0.889
SMTD_0001089601 Schistosoma mattheei SMTD_0001089601 I 0.889
TRE_0000568701 Trichobilharzia regenti TRE_0000568701 I 0.889
ENSVPAG00000005031 Vicugna pacos ENSVPAG00000005031 I 0.833
GPLIN_001569000 Globodera pallida GPLIN_001569000 I 0.824
RBPJ Homo sapiens ENSG00000168214 D 0.812
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0 I 0.765
DAPPUDRAFT_98470 Daphnia pulex DAPPUDRAFT_98470 I 0.760
Su(H) Drosophila melanogaster FBgn0004837 D 0.752
Su(H) Drosophila simulans FBgn0027417 I 0.752
GF14905 Drosophila ananassae FBgn0091930 I 0.752
GG25142 Drosophila erecta FBgn0117267 I 0.752
GH10915 Drosophila grimshawi FBgn0118396 I 0.752
GL26026 Drosophila persimilis FBgn0163608 I 0.752
GM15894 Drosophila sechellia FBgn0170810 I 0.752
GJ11880 Drosophila virilis FBgn0199134 I 0.752
GE20814 Drosophila yakuba FBgn0238107 I 0.752
GA25242 Drosophila pseudoobscura FBgn0246623 I 0.752
GA25243 Drosophila pseudoobscura FBgn0246624 I 0.752
SMAR001432 Strigamia maritima SMAR001432 I 0.752
Ocbimv22031643m.g Octopus bimaculoides Ocbimv22031643m.g I 0.740
CGI_10018383 Crassostrea gigas CGI_10018383 I 0.733
LotgiG159505 Lottia gigantea LotgiG159505 I 0.733
Sakowv30027441m.g Saccoglossus kowalevskii Sakowv30027441m.g I 0.733
AAEL006419 Aedes aegypti AAEL006419 I 0.728
RBPJ Cavia porcellus ENSCPOG00000007041 I 0.724
rbpjb Danio rerio ENSDARG00000052091 I 0.720
CLEC005205 Cimex lectularius CLEC005205 I 0.720
GI13259 Drosophila mojavensis FBgn0136016 I 0.718
BGIBMGA003113 Bombyx mori BGIBMGA003113 I 0.712
NV17858 Nasonia vitripennis NV17858 I 0.712
TC014468 Tribolium castaneum TC014468 I 0.712
LDEC018359 Leptinotarsa decemlineata LDEC018359 I 0.712
LLOJ000758 Lutzomyia longipalpis LLOJ000758 I 0.711
ISCW010197 Ixodes scapularis ISCW010197 I 0.710
LCUP003485 Lucilia cuprina LCUP003485 I 0.710
MDOA002342 Musca domestica MDOA002342 I 0.710
AALB007981 Anopheles albimanus AALB007981 I 0.704
ASTEI01929 Anopheles stephensi ASTEI01929 I 0.704
LLOJ000759 Lutzomyia longipalpis LLOJ000759 I 0.702
PPAI000792 Phlebotomus papatasi PPAI000792 I 0.702