CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_21300003.1
(
Arabidopsis lyrata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
scaffold_21300003.1
T201387_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_21300003.1
GRAS
1
89
MQHRLYDVTRNDLETLEILRRLKPNLITVVEQKLSYDDGGSFLGRFVEALQYYYSARGDGLGEESGERFTVEQIVSSCAVVIMGSRLAL
Links
Other
GRAS
family TFs
Other
Arabidopsis lyrata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SCL23
Arabidopsis thaliana
AT5G41920
N
0.739
Cagra.6263s0002
Capsella grandiflora
Cagra.6263s0002
N
0.727
scaffold_503520.1
Arabidopsis lyrata
scaffold_503520.1
N
0.830