CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold_501562.1
(
Arabidopsis lyrata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
scaffold_501562.1
T201390_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_501562.1
GRAS
214
584
MRNLLMQCAQAVASFDQRRASEKLKEIREHSSSHGDATQRLGYHFAEALEARITGTMTTPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTIVELASKATTLHIIDFGILYGFQWPCLIQALSKRDTGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFKVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPETYKQWQVRILRAGFRPAKLNKQIVKDGKEIVKQRYHKDFVIDNDNNWMFQGWKGRVLYAVSCWK
Links
Other
GRAS
family TFs
Other
Arabidopsis lyrata
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA025973
Oryza indica
BGIOSGA025973
N
BRADI1G24140
Brachypodium distachyon
BRADI1G24140
N
GRMZM2G081782
Zea mays
GRMZM2G081782
N
LPERR07G16580
Leersia perrieri
LPERR07G16580
N
MLOC_52196
Hordeum vulgare
MLOC_52196
N
OBART07G19250
Oryza barthii
OBART07G19250
N
OGLUM07G19030
Oryza glumaepatula
OGLUM07G19030
N
OLONG_002240
Oryza longistaminata
OLONG_002240
N
ONIVA07G17600
Oryza nivara
ONIVA07G17600
N
ORGLA07G0246500
Oryza glaberrima
ORGLA07G0246500
N
ORUFI07G20030
Oryza rufipogon
ORUFI07G20030
N
OS07G0569700
Oryza sativa
OS07G0569700
N
Pavir.Ba00594
Panicum virgatum
Pavir.Ba00594
N
Pavir.J03938
Panicum virgatum
Pavir.J03938
N
Sb02g036840
Sorghum bicolor
Sb02g036840
N
Traes_2AS_E9A1F35CB
Triticum aestivum
Traes_2AS_E9A1F35CB
N
Traes_2BS_67D862F4A
Triticum aestivum
Traes_2BS_67D862F4A
N
Traes_2DS_2CE71025C
Triticum aestivum
Traes_2DS_2CE71025C
N
TRIUR3_28482
Triticum urartu
TRIUR3_28482
N